Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.46653	1500004A08Rik	RIKEN cDNA 1500004A08 gene	11		216505
Human Homolog	MGC17330[HGFL gene]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC CTCCGAAGGA (3) 1.6 0.0016 P8 Cb GC GTTTTAAAAA (22) 1.6 0.0016 P8 Cb GC GTTTTACCTT 1.6 0.0016 P8 Cb GC TTGCTGAGAA 1.6 0.0016 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GTTTTACCTT 9.2 0.0092 Cb medulloblastoma GTTTTAAAAA (22) 4.6 0.0046 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture GTTTTACCTT 9.1 0.0091 P8 GC+1d culture ATGGAGGGAG (4) 3.4 0.0034 P8 GC+1d culture GTTTTAAAAA (22) 1.1 0.0011 P8 GC+1d culture TAAACACTGG (5) 1.1 0.0011 P8 GC+1d culture TGGTTGAGGT (3) 1.1 0.0011 P8 GC+1d culture TTGCTGAGAA 1.1 0.0011 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture GTTTTACCTT 9.4 0.0094 P8 GC+SHH+1d culture GTTTTAAAAA (22) 8.2 0.0082 P8 GC+SHH+1d culture ATGGAGGGAG (4) 3.5 0.0035 P8 GC+SHH+1d culture GATGGCAATG (5) 1.2 0.0012 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 3T3 fibroblasts GTTTTACCTT 7 0.007 3T3 fibroblasts TAAACACTGG (5) 3.5 0.0035 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex GTTTTAAAAA (22) 4.9 0.0049 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 P1 cortex GTTTTACCTT 4.5 0.0045 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus ATGGAGGGAG (4) 3.6 0.0036 Hypothalamus GTTTTACCTT 3.6 0.0036 Hypothalamus TTGCTGAGAA 1.8 0.0018 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina GTTTTAAAAA (22) 3.8 0.0038 E12.5 retina GTTTTACCTT 3.8 0.0038 E12.5 retina ATGGAGGGAG (4) 1.9 0.0019 E12.5 retina TTGCTGAGAA 1.9 0.0019 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina GTTTTAAAAA (22) 9.1 0.0091 E14.5 retina GCCTCAAACT (2) 1.8 0.0018 E14.5 retina GTTTTACCTT 1.8 0.0018 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina GTTTTAAAAA (22) 7.2 0.0072 E16.5 retina GTTTTACCTT 3.6 0.0036 E16.5 retina TTGCTGAGAA 1.8 0.0018 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina GTTTTAAAAA (22) 25.5 0.0255 E18.5 retina GTTTTACCTT 7.3 0.0073 E18.5 retina ATGGAGGGAG (4) 3.6 0.0036 E18.5 retina GTGGTGGTGA (7) 1.8 0.0018 E18.5 retina TTGCTGAGAA 1.8 0.0018 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina GTTTTACCTT 5.9 0.0059 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina ATGGAGGGAG (4) 2 0.002 P0.5 retina TGGTTGAGGT (3) 2 0.002 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina GTTTTACCTT 7 0.007 P2.5 retina CTCCGAAGGA (3) 1.8 0.0018 P2.5 retina GTTTTAAAAA (22) 1.8 0.0018 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina GTTTTAAAAA (22) 5.9 0.0059 P4.5 retina GTTTTACCTT 5.9 0.0059 P4.5 retina ATGGAGGGAG (4) 2 0.002 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina GTTTTACCTT 5 0.005 P6.5 retina GATGGCAATG (5) 1.7 0.0017 P6.5 retina GTTTTAAAAA (22) 1.7 0.0017 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina GTGGTGGTGA (7) 3.7 0.0037 P10.5 crx- retina ATGGAGGGAG (4) 1.9 0.0019 P10.5 crx- retina GTTTTACCTT 1.9 0.0019 P10.5 crx- retina TAAACACTGG (5) 1.9 0.0019 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina GTTTTACCTT 5.8 0.0058 P10.5 crx+ retina ATGGAGGGAG (4) 3.8 0.0038 P10.5 crx+ retina CTCCGAAGGA (3) 1.9 0.0019 P10.5 crx+ retina GATGGCAATG (5) 1.9 0.0019 P10.5 crx+ retina TGGTTGAGGT (3) 1.9 0.0019 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal ATGGAGGGAG (4) 1.9 0.0019 Adult retinal TAAACACTGG (5) 1.9 0.0019 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL GCCTCAAACT (2) 3.8 0.0038 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL GTTTTAAAAA (22) 3.8 0.0038 ONL ATGGAGGGAG (4) 1.9 0.0019 ONL TAAACACTGG (5) 1.9 0.0019