Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4908	Csng	casein gamma	5	5 44.93 cM	12993
Gene Ontology	extracellular | extracellular space | transport | transporter activity
Human Homolog	CSN1S2A[casein alpha s2-like A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GTTAACTGAA (2) 6.5 0.0065 P8 Cb GC TGTAGTTCCA (2) 6.5 0.0065 P8 Cb GC GGGTTCTTCG (2) 3.3 0.0033 P8 Cb GC GTCACCATCC (5) 3.3 0.0033 P8 Cb GC TCTCCCTTTT (3) 1.6 0.0016 P8 Cb GC TTAATTGAAG (3) 1.6 0.0016 P8 Cb GC TTTTCTGGTT (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGTAGTTCCA (2) 4.6 0.0046 Cb medulloblastoma TTAATTGAAG (3) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGTAGTTCCA (2) 11.4 0.0114 P8 GC+1d culture GTTAACTGAA (2) 5.7 0.0057 P8 GC+1d culture TCTCCCTTTT (3) 2.3 0.0023 P8 GC+1d culture TTCTTCCAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGTAGTTCCA (2) 8.2 0.0082 P8 GC+SHH+1d culture GTTAACTGAA (2) 5.9 0.0059 P8 GC+SHH+1d culture GGGTTCTTCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCACCATCC (5) 1.2 0.0012 P8 GC+SHH+1d culture TTAATTGAAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTGGTT (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GTTAACTGAA (2) 7 0.007 3T3 fibroblasts TTCTTCCAAA (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGTAGTTCCA (2) 9.9 0.0099 E15 cortex GTTAACTGAA (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GTTAACTGAA (2) 13.6 0.0136 P1 cortex GTTTAATGAA (5) 4.5 0.0045 P1 cortex TGTAGTTCCA (2) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TGTAGTTCCA (2) 9.1 0.0091 Hypothalamus TTTTCTGGTT (4) 3.6 0.0036 Hypothalamus GGGTTCTTCG (2) 1.8 0.0018 Hypothalamus GTGGTGAGGA (2) 1.8 0.0018 Hypothalamus TCTCCCTTTT (3) 1.8 0.0018 Hypothalamus TTAATTGAAG (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TGTAGTTCCA (2) 13.1 0.0131 E12.5 retina GTTTAATGAA (5) 5.6 0.0056 E12.5 retina GTTAACTGAA (2) 1.9 0.0019 E12.5 retina TTAATTGAAG (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTTTAATGAA (5) 10.9 0.0109 E14.5 retina TTAATTGAAG (3) 9.1 0.0091 E14.5 retina TGTAGTTCCA (2) 5.5 0.0055 E14.5 retina GTTAACTGAA (2) 3.6 0.0036 E14.5 retina TGGCCCCAGC (4) 3.6 0.0036 E14.5 retina GGGTTCTTCG (2) 1.8 0.0018 E14.5 retina TTCTTCCAAA (3) 1.8 0.0018 E14.5 retina TTTTCTGGTT (4) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TGTAGTTCCA (2) 9.1 0.0091 E16.5 retina TTAATTGAAG (3) 7.2 0.0072 E16.5 retina GTTTAATGAA (5) 5.4 0.0054 E16.5 retina GTTAACTGAA (2) 3.6 0.0036 E16.5 retina TTTTCTGGTT (4) 3.6 0.0036 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGTAGTTCCA (2) 9.1 0.0091 E18.5 retina GTTTAATGAA (5) 3.6 0.0036 E18.5 retina GGGTTCTTCG (2) 1.8 0.0018 E18.5 retina GTTAACTGAA (2) 1.8 0.0018 E18.5 retina TACACCCCCA (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGTAGTTCCA (2) 11.8 0.0118 P0.5 retina GTTAACTGAA (2) 7.9 0.0079 P0.5 retina GTTTAATGAA (5) 3.9 0.0039 P0.5 retina TTAATTGAAG (3) 3.9 0.0039 P0.5 retina CTCTAAGCCA (2) 2 0.002 P0.5 retina GTCACCATCC (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTTTAATGAA (5) 5.3 0.0053 P2.5 retina TGTAGTTCCA (2) 5.3 0.0053 P2.5 retina GTCACCATCC (5) 1.8 0.0018 P2.5 retina TACACCCCCA (3) 1.8 0.0018 P2.5 retina TTAATTGAAG (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TGTAGTTCCA (2) 11.9 0.0119 P4.5 retina GTTTAATGAA (5) 9.9 0.0099 P4.5 retina GTCACCATCC (5) 4 0.004 P4.5 retina GTTAACTGAA (2) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TGTAGTTCCA (2) 6.7 0.0067 P6.5 retina GTTAACTGAA (2) 3.3 0.0033 P6.5 retina TTTTCTGGTT (4) 3.3 0.0033 P6.5 retina GTTTAATGAA (5) 1.7 0.0017 P6.5 retina TTAATTGAAG (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TACACCCCCA (3) 14.9 0.0149 P10.5 crx- retina GTTAACTGAA (2) 5.6 0.0056 P10.5 crx- retina CTCTAAGCCA (2) 3.7 0.0037 P10.5 crx- retina GGGTTCTTCG (2) 3.7 0.0037 P10.5 crx- retina TGTAGTTCCA (2) 3.7 0.0037 P10.5 crx- retina TGGCCCCAGC (4) 1.9 0.0019 P10.5 crx- retina TTAATTGAAG (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TGTAGTTCCA (2) 13.5 0.0135 P10.5 crx+ retina GTTTAATGAA (5) 5.8 0.0058 P10.5 crx+ retina GGGTTCTTCG (2) 1.9 0.0019 P10.5 crx+ retina GTCACCATCC (5) 1.9 0.0019 P10.5 crx+ retina GTGGTGAGGA (2) 1.9 0.0019 P10.5 crx+ retina TTCTTCCAAA (3) 1.9 0.0019 P10.5 crx+ retina TTTTCTGGTT (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTCACCATCC (5) 1.9 0.0019 Adult retinal GTTTAATGAA (5) 1.9 0.0019 Adult retinal TGTAGTTCCA (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTTTAATGAA (5) 7.7 0.0077 ONL TGTAGTTCCA (2) 5.7 0.0057 ONL GTCACCATCC (5) 1.9 0.0019 ONL GTTAACTGAA (2) 1.9 0.0019 ONL TTAATTGAAG (3) 1.9 0.0019