Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4920	Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	11	11 31.0 cM	14799
Gene Ontology	extracellular space | glutamate-gated ion channel activity | inotropic glutamate receptor activity | integral to membrane | ion channel activity | ion transport | membrane | potassium channel activity | potassium ion transport | protein amino acid prenylation | protein binding | protein prenyltransferase activity | receptor activity | synaptic transmission | transport | transporter activity
Human Homolog	GRIA1[glutamate receptor, ionotropic, AMPA 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGATCCC (2) 9.8 0.0098 P8 Cb GC CGGCTTTTAG (2) 1.6 0.0016 Cb medulloblastoma AGCCACAGTT (3) 11.6 0.0116 Cb medulloblastoma ACTCCGGGGA 6.9 0.0069 Cb medulloblastoma CAGAGATCCC (2) 6.9 0.0069 Cb medulloblastoma CAGGGAATGG 2.3 0.0023 P8 GC+1d culture CGGCTTTTAG (2) 2.3 0.0023 P8 GC+1d culture CAGAGATCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture CAGAGATCCC (2) 4.7 0.0047 P8 GC+SHH+1d culture CGGCTTTTAG (2) 1.2 0.0012 3T3 fibroblasts CAGAGATCCC (2) 38.6 0.0386 E15 cortex ACTCCGGGGA 9.9 0.0099 E15 cortex CAGAGATCCC (2) 4.9 0.0049 E15 cortex CGGCTTTTAG (2) 4.9 0.0049 P1 cortex AGCCACAGTT (3) 9.1 0.0091 P1 cortex ACTCCGGGGA 4.5 0.0045 Hypothalamus ACTCCGGGGA 9.1 0.0091 Hypothalamus CAGAGATCCC (2) 3.6 0.0036 E12.5 retina CAGAGATCCC (2) 9.4 0.0094 E14.5 retina CAGAGATCCC (2) 5.5 0.0055 E16.5 retina CAGAGATCCC (2) 9.1 0.0091 E16.5 retina CAGGGAATGG 1.8 0.0018 E18.5 retina CAGAGATCCC (2) 5.5 0.0055 P0.5 retina CAGAGATCCC (2) 19.6 0.0196 P0.5 retina CGGCTTTTAG (2) 2 0.002 P2.5 retina CAGAGATCCC (2) 19.4 0.0194 P2.5 retina CAGGGAATGG 1.8 0.0018 P2.5 retina CGGCTTTTAG (2) 1.8 0.0018 P4.5 retina CAGAGATCCC (2) 4 0.004 P4.5 retina CAGGGAATGG 2 0.002 P6.5 retina CGGCTTTTAG (2) 3.3 0.0033 P6.5 retina CAGGGAATGG 1.7 0.0017 P10.5 crx- retina ACTCCGGGGA 3.7 0.0037 P10.5 crx- retina CAGGGAATGG 1.9 0.0019 P10.5 crx- retina CGGCTTTTAG (2) 1.9 0.0019 P10.5 crx+ retina ACTCCGGGGA 1.9 0.0019 P10.5 crx+ retina CAGGGAATGG 1.9 0.0019 Adult retinal ACTCCGGGGA 1.9 0.0019 Adult retinal CAGAGATCCC (2) 1.9 0.0019 Adult retinal CGGCTTTTAG (2) 1.9 0.0019