Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.50424	Tax1bp1	Tax1 (human T-cell leukemia virus type I) binding protein 1	6	6 B3 (6 26.0 cM)	52440
Mm.50424	1700069J21Rik	RIKEN cDNA 1700069J21 gene	6		73506
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCACTGATA (2) 9.8 0.0098 P8 Cb GC GTTTCTGAAG (3) 3.3 0.0033 P8 Cb GC TCATTTTTCA (3) 3.3 0.0033 P8 Cb GC GCCCCCCTCT (5) 1.6 0.0016 Cb medulloblastoma ACCACTGATA (2) 13.9 0.0139 Cb medulloblastoma GCCCCCCTCT (5) 13.9 0.0139 Cb medulloblastoma AGAGAGAGCA (5) 2.3 0.0023 Cb medulloblastoma CTCTTGCTTT (5) 2.3 0.0023 Cb medulloblastoma TATTTTCAAA (5) 2.3 0.0023 Cb medulloblastoma TTTATGTTTG (3) 2.3 0.0023 P8 GC+1d culture GCCCCCCTCT (5) 14.8 0.0148 P8 GC+1d culture ACCACTGATA (2) 13.7 0.0137 P8 GC+1d culture TCATTTTTCA (3) 2.3 0.0023 P8 GC+1d culture CTCTTGCTTT (5) 1.1 0.0011 P8 GC+1d culture GAGCAGGCTT (4) 1.1 0.0011 P8 GC+1d culture TATTTTCAAA (5) 1.1 0.0011 P8 GC+SHH+1d culture ACCACTGATA (2) 10.5 0.0105 P8 GC+SHH+1d culture GCCCCCCTCT (5) 7 0.007 P8 GC+SHH+1d culture GTTTCTGAAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTCAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTGAAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTATGTTTG (3) 1.2 0.0012 3T3 fibroblasts TCTGTGAAAT (2) 3.5 0.0035 E15 cortex GCCCCCCTCT (5) 59.4 0.0594 E15 cortex AGAGAGAGCA (5) 4.9 0.0049 P1 cortex GCCCCCCTCT (5) 72.7 0.0727 P1 cortex ACCACTGATA (2) 18.2 0.0182 P1 cortex AGAGAGAGCA (5) 4.5 0.0045 Hypothalamus ACCACTGATA (2) 12.7 0.0127 Hypothalamus GCCCCCCTCT (5) 12.7 0.0127 Hypothalamus ACCCCTGATA (3) 1.8 0.0018 Hypothalamus GTTTCTGAAG (3) 1.8 0.0018 Hypothalamus TCATTTTTCA (3) 1.8 0.0018 E12.5 retina CTCTTGCTTT (5) 3.8 0.0038 E12.5 retina GTTTCTGAAG (3) 3.8 0.0038 E12.5 retina ACCACTGATA (2) 1.9 0.0019 E12.5 retina TCATTTTTCA (3) 1.9 0.0019 E14.5 retina ACCACTGATA (2) 14.6 0.0146 E14.5 retina GTTTCTGAAG (3) 1.8 0.0018 E14.5 retina TCATTTTTCA (3) 1.8 0.0018 E14.5 retina TTTATGTTTG (3) 1.8 0.0018 E16.5 retina ACCACTGATA (2) 19.9 0.0199 E16.5 retina ACCCCTGATA (3) 1.8 0.0018 E16.5 retina CTCTTGCTTT (5) 1.8 0.0018 E16.5 retina TCATTTTTCA (3) 1.8 0.0018 E16.5 retina TTCTGAGCAA (3) 1.8 0.0018 E16.5 retina TTTATGTTTG (3) 1.8 0.0018 E18.5 retina ACCACTGATA (2) 18.2 0.0182 E18.5 retina GTTTCTGAAG (3) 3.6 0.0036 E18.5 retina GCCCCCCTCT (5) 1.8 0.0018 E18.5 retina TCATTTTTCA (3) 1.8 0.0018 P0.5 retina ACCACTGATA (2) 15.7 0.0157 P0.5 retina GTTTCTGAAG (3) 5.9 0.0059 P0.5 retina GCCCCCCTCT (5) 3.9 0.0039 P0.5 retina TCATTTTTCA (3) 3.9 0.0039 P0.5 retina CTCTTGCTTT (5) 2 0.002 P2.5 retina ACCACTGATA (2) 22.9 0.0229 P2.5 retina GCCCCCCTCT (5) 10.6 0.0106 P2.5 retina GTTTCTGAAG (3) 3.5 0.0035 P2.5 retina TATTTTCAAA (5) 1.8 0.0018 P2.5 retina TCATTTTTCA (3) 1.8 0.0018 P4.5 retina ACCACTGATA (2) 19.8 0.0198 P4.5 retina GCCCCCCTCT (5) 13.9 0.0139 P4.5 retina GTTTCTGAAG (3) 2 0.002 P6.5 retina GCCCCCCTCT (5) 35 0.035 P6.5 retina ACCACTGATA (2) 20 0.02 P6.5 retina TCATTTTTCA (3) 5 0.005 P6.5 retina CTCTTGCTTT (5) 1.7 0.0017 P10.5 crx- retina ACCACTGATA (2) 31.6 0.0316 P10.5 crx- retina GCCCCCCTCT (5) 22.3 0.0223 P10.5 crx- retina GTTTCTGAAG (3) 5.6 0.0056 P10.5 crx- retina CTCTTGCTTT (5) 3.7 0.0037 P10.5 crx- retina TCATTTTTCA (3) 3.7 0.0037 P10.5 crx- retina TCTGTGAAAT (2) 1.9 0.0019 P10.5 crx- retina TTCTGAGCAA (3) 1.9 0.0019 P10.5 crx+ retina ACCACTGATA (2) 53.8 0.0538 P10.5 crx+ retina GCCCCCCTCT (5) 28.8 0.0288 P10.5 crx+ retina GAGCAGGCTT (4) 1.9 0.0019 P10.5 crx+ retina TATTTTCAAA (5) 1.9 0.0019 P10.5 crx+ retina TTTATGTTTG (3) 1.9 0.0019 Adult retinal GCCCCCCTCT (5) 53.7 0.0537 Adult retinal ACCACTGATA (2) 16.7 0.0167 Adult retinal GTTTCTGAAG (3) 3.7 0.0037 Adult retinal CTCTTGCTTT (5) 1.9 0.0019 ONL ACCACTGATA (2) 42.1 0.0421 ONL GCCCCCCTCT (5) 30.6 0.0306 ONL CTCTTGCTTT (5) 1.9 0.0019 ONL TTCTGAGCAA (3) 1.9 0.0019