Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.59812	1200009B18Rik	RIKEN cDNA 1200009B18 gene	6		67456
Mm.59812	4732416N19Rik	RIKEN cDNA 4732416N19 gene	6		320737
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTGAATAA (3) 14.7 0.0147 P8 Cb GC TTGTGCAATA (2) 4.9 0.0049 P8 Cb GC AAGAGCAACC (8) 1.6 0.0016 P8 Cb GC GAATTGGACA (3) 1.6 0.0016 P8 Cb GC GTTAATAAAG (9) 1.6 0.0016 P8 Cb GC GTTTTAAAAA (22) 1.6 0.0016 P8 Cb GC TCTACTTACT (3) 1.6 0.0016 Cb medulloblastoma ATGTGAATAA (3) 9.2 0.0092 Cb medulloblastoma GTCATCTTTA (3) 4.6 0.0046 Cb medulloblastoma GTTAATAAAG (9) 4.6 0.0046 Cb medulloblastoma GTTTTAAAAA (22) 4.6 0.0046 Cb medulloblastoma GAATTGGACA (3) 2.3 0.0023 P8 GC+1d culture ATGTGAATAA (3) 11.4 0.0114 P8 GC+1d culture GTCATCTTTA (3) 2.3 0.0023 P8 GC+1d culture GTTAATAAAG (9) 2.3 0.0023 P8 GC+1d culture AAGAGCAACA (2) 1.1 0.0011 P8 GC+1d culture ATTTCTTTAC (4) 1.1 0.0011 P8 GC+1d culture GTTTTAAAAA (22) 1.1 0.0011 P8 GC+1d culture TCAGGCTGTT (2) 1.1 0.0011 P8 GC+1d culture TCTACTTACT (3) 1.1 0.0011 P8 GC+1d culture TGAGACTAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGTGAATAA (3) 16.4 0.0164 P8 GC+SHH+1d culture GTTTTAAAAA (22) 8.2 0.0082 P8 GC+SHH+1d culture GTCATCTTTA (3) 3.5 0.0035 P8 GC+SHH+1d culture TCTACTTACT (3) 3.5 0.0035 P8 GC+SHH+1d culture ATTTCTTTAC (4) 1.2 0.0012 P8 GC+SHH+1d culture GAAACTCTAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTGTGCAATA (2) 1.2 0.0012 E15 cortex GAATTGGACA (3) 4.9 0.0049 E15 cortex GTTTTAAAAA (22) 4.9 0.0049 P1 cortex GAAACTCTAG (3) 4.5 0.0045 P1 cortex GTCATCTTTA (3) 4.5 0.0045 Hypothalamus ATGTGAATAA (3) 9.1 0.0091 Hypothalamus GTCATCTTTA (3) 3.6 0.0036 Hypothalamus AAGAGCAACA (2) 1.8 0.0018 Hypothalamus GAAACTCTAG (3) 1.8 0.0018 Hypothalamus GGCATCTTTA (2) 1.8 0.0018 Hypothalamus TCAGGCTGTT (2) 1.8 0.0018 Hypothalamus TCTACTTACT (3) 1.8 0.0018 Hypothalamus TGAGACTAAG (2) 1.8 0.0018 E12.5 retina ATGTGAATAA (3) 15 0.015 E12.5 retina AAGAGCAACC (8) 5.6 0.0056 E12.5 retina GTTTTAAAAA (22) 3.8 0.0038 E12.5 retina GAAACTCTAG (3) 1.9 0.0019 E12.5 retina GTCATCTTTA (3) 1.9 0.0019 E12.5 retina TCAGGCTGTT (2) 1.9 0.0019 E14.5 retina ATGTGAATAA (3) 16.4 0.0164 E14.5 retina GTTTTAAAAA (22) 9.1 0.0091 E14.5 retina GTTAATAAAG (9) 7.3 0.0073 E14.5 retina AAGAGCAACC (8) 1.8 0.0018 E14.5 retina GAAACTCTAG (3) 1.8 0.0018 E14.5 retina GTCATCTTTA (3) 1.8 0.0018 E14.5 retina TCAGGCTGTT (2) 1.8 0.0018 E16.5 retina ATGTGAATAA (3) 19.9 0.0199 E16.5 retina AAGAGCAACC (8) 7.2 0.0072 E16.5 retina GTCATCTTTA (3) 7.2 0.0072 E16.5 retina GTTTTAAAAA (22) 7.2 0.0072 E16.5 retina GAAACTCTAG (3) 3.6 0.0036 E18.5 retina ATGTGAATAA (3) 25.5 0.0255 E18.5 retina GTTTTAAAAA (22) 25.5 0.0255 E18.5 retina GTCATCTTTA (3) 10.9 0.0109 E18.5 retina AAGAGCAACC (8) 3.6 0.0036 E18.5 retina GAATTGGACA (3) 1.8 0.0018 E18.5 retina GTTAATAAAG (9) 1.8 0.0018 E18.5 retina TTGTGCAATA (2) 1.8 0.0018 P0.5 retina AAGAGCAACC (8) 7.9 0.0079 P0.5 retina ATGTGAATAA (3) 7.9 0.0079 P0.5 retina GAAACTCTAG (3) 2 0.002 P0.5 retina GTTAATAAAG (9) 2 0.002 P2.5 retina ATGTGAATAA (3) 10.6 0.0106 P2.5 retina CACTCTGGTG (3) 3.5 0.0035 P2.5 retina GTCATCTTTA (3) 3.5 0.0035 P2.5 retina GTTAATAAAG (9) 3.5 0.0035 P2.5 retina TTGTGCAATA (2) 3.5 0.0035 P2.5 retina GAAACTCTAG (3) 1.8 0.0018 P2.5 retina GAATTGGACA (3) 1.8 0.0018 P2.5 retina GGCATCTTTA (2) 1.8 0.0018 P2.5 retina GTTTTAAAAA (22) 1.8 0.0018 P2.5 retina TCTACTTACT (3) 1.8 0.0018 P4.5 retina ATGTGAATAA (3) 15.9 0.0159 P4.5 retina GTCATCTTTA (3) 15.9 0.0159 P4.5 retina GTTTTAAAAA (22) 5.9 0.0059 P4.5 retina GAAACTCTAG (3) 4 0.004 P4.5 retina TCTACTTACT (3) 4 0.004 P4.5 retina TTGTGCAATA (2) 4 0.004 P4.5 retina AAGAGCAACC (8) 2 0.002 P4.5 retina GTTAATAAAG (9) 2 0.002 P4.5 retina TCAGGCTGTT (2) 2 0.002 P6.5 retina ATGTGAATAA (3) 15 0.015 P6.5 retina GTCATCTTTA (3) 6.7 0.0067 P6.5 retina GAAACTCTAG (3) 3.3 0.0033 P6.5 retina AAGAGCAACA (2) 1.7 0.0017 P6.5 retina CACTCTGGTG (3) 1.7 0.0017 P6.5 retina GAATTGGACA (3) 1.7 0.0017 P6.5 retina GGCATCTTTA (2) 1.7 0.0017 P6.5 retina GTTTTAAAAA (22) 1.7 0.0017 P6.5 retina TGAGACTAAG (2) 1.7 0.0017 P10.5 crx- retina ATGTGAATAA (3) 13 0.013 P10.5 crx- retina AAGAGCAACC (8) 11.1 0.0111 P10.5 crx- retina GTCATCTTTA (3) 3.7 0.0037 P10.5 crx- retina GAAACTCTAG (3) 1.9 0.0019 P10.5 crx+ retina ATGTGAATAA (3) 13.5 0.0135 P10.5 crx+ retina GTCATCTTTA (3) 5.8 0.0058 P10.5 crx+ retina AAGAGCAACA (2) 1.9 0.0019 P10.5 crx+ retina AAGAGCAACC (8) 1.9 0.0019 P10.5 crx+ retina GAAACTCTAG (3) 1.9 0.0019 P10.5 crx+ retina TTGTGCAATA (2) 1.9 0.0019 Adult retinal ATGTGAATAA (3) 1.9 0.0019 Adult retinal GAATTGGACA (3) 1.9 0.0019 Adult retinal GGCATCTTTA (2) 1.9 0.0019 Adult retinal GTCATCTTTA (3) 1.9 0.0019 Adult retinal TCTACTTACT (3) 1.9 0.0019 Adult retinal TTGTGCAATA (2) 1.9 0.0019 ONL ATGTGAATAA (3) 11.5 0.0115 ONL GAAACTCTAG (3) 5.7 0.0057 ONL GTTTTAAAAA (22) 3.8 0.0038 ONL ATTTCTTTAC (4) 1.9 0.0019 ONL TCTACTTACT (3) 1.9 0.0019 ONL TTGTGCAATA (2) 1.9 0.0019