Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.643	Rps15	ribosomal protein S15	10		20054
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS15[ribosomal protein S15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 159 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGGCGTGT (3) 75 0.075 P8 Cb GC CTGGGCGTGT (5) 11.4 0.0114 P8 Cb GC ATCATCCTCC (2) 3.3 0.0033 P8 Cb GC GGTGGTGCCT (7) 3.3 0.0033 P8 Cb GC TCCTATGAGC (2) 3.3 0.0033 P8 Cb GC TCGAGCAGTT 3.3 0.0033 P8 Cb GC GTGGGCCCAT (2) 1.6 0.0016 P8 Cb GC TCCCTCAAAA (3) 1.6 0.0016 Cb medulloblastoma GTGGGCGTGT (3) 43.9 0.0439 Cb medulloblastoma GGGTGGCCCA (8) 16.2 0.0162 Cb medulloblastoma CTGGGCGTGT (5) 4.6 0.0046 Cb medulloblastoma GAGAAGCCTG (8) 4.6 0.0046 Cb medulloblastoma TCGAGCAGTT 4.6 0.0046 Cb medulloblastoma AGGGAAATAA (3) 2.3 0.0023 Cb medulloblastoma ATCATCCTCC (2) 2.3 0.0023 Cb medulloblastoma GGTGGTGCCT (7) 2.3 0.0023 Cb medulloblastoma GGTGGTGGCT (4) 2.3 0.0023 Cb medulloblastoma TCCCTCAAAA (3) 2.3 0.0023 Cb medulloblastoma TGGGCGTGTA 2.3 0.0023 P8 GC+1d culture GTGGGCGTGT (3) 97 0.097 P8 GC+1d culture TCGAGCAGTT 6.8 0.0068 P8 GC+1d culture CTGGGCGTGT (5) 4.6 0.0046 P8 GC+1d culture GGTGGTGCCT (7) 3.4 0.0034 P8 GC+1d culture CCAGGCCGGG (3) 1.1 0.0011 P8 GC+1d culture GAGAAGCCTG (8) 1.1 0.0011 P8 GC+1d culture TCCTATGAGC (2) 1.1 0.0011 P8 GC+1d culture TGGGCGTGTA 1.1 0.0011 P8 GC+SHH+1d culture GTGGGCGTGT (3) 86.6 0.0866 P8 GC+SHH+1d culture TCGAGCAGTT 14.1 0.0141 P8 GC+SHH+1d culture CTGGGCGTGT (5) 4.7 0.0047 P8 GC+SHH+1d culture AGGGAAATAA (3) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGTGCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture GAGAAGCCTG (8) 2.3 0.0023 P8 GC+SHH+1d culture TGGGCGTGTA 2.3 0.0023 P8 GC+SHH+1d culture TCCCTCAAAA (3) 1.2 0.0012 3T3 fibroblasts GTGGGCGTGT (3) 494.2 0.4942 3T3 fibroblasts TCGAGCAGTT 59.6 0.0596 3T3 fibroblasts CTGGGCGTGT (5) 45.6 0.0456 3T3 fibroblasts GGTGGTGCCT (7) 10.5 0.0105 3T3 fibroblasts GAGAAGCCTG (8) 7 0.007 3T3 fibroblasts GTGGGCGTGA (2) 7 0.007 E15 cortex GTGGGCGTGT (3) 133.6 0.1336 E15 cortex CTGGGCGTGT (5) 14.8 0.0148 E15 cortex CCAGGCCGGG (3) 9.9 0.0099 E15 cortex GGGCGGGGGG (11) 4.9 0.0049 E15 cortex GTGGGCCCAT (2) 4.9 0.0049 E15 cortex GTGGGCCGTG 4.9 0.0049 P1 cortex GTGGGCGTGT (3) 50 0.05 P1 cortex GTGGGCCCAT (2) 4.5 0.0045 P1 cortex TCGAGCAGTT 4.5 0.0045 Hypothalamus GTGGGCGTGT (3) 41.7 0.0417 Hypothalamus TCGAGCAGTT 14.5 0.0145 Hypothalamus GGTGGTGCCT (7) 7.2 0.0072 Hypothalamus CTGGGCGTGT (5) 1.8 0.0018 Hypothalamus GAGAAGCCTG (8) 1.8 0.0018 E12.5 retina GTGGGCGTGT (3) 71.3 0.0713 E12.5 retina TCGAGCAGTT 24.4 0.0244 E12.5 retina GGTGGTGCCT (7) 9.4 0.0094 E12.5 retina CTGGGCGTGT (5) 3.8 0.0038 E12.5 retina TCCCTCAAAA (3) 3.8 0.0038 E12.5 retina AGGGAAATAA (3) 1.9 0.0019 E12.5 retina GAGAAGCCTG (8) 1.9 0.0019 E12.5 retina GGGCGGGGGG (11) 1.9 0.0019 E12.5 retina TGGGCGTGTA 1.9 0.0019 E14.5 retina GTGGGCGTGT (3) 56.5 0.0565 E14.5 retina AGGGAAATAA (3) 5.5 0.0055 E14.5 retina GGTGGTGCCT (7) 5.5 0.0055 E14.5 retina TCGAGCAGTT 5.5 0.0055 E14.5 retina ATCATCCTGC (5) 1.8 0.0018 E14.5 retina CCAGGCCGGG (3) 1.8 0.0018 E14.5 retina CTGGGCGTGT (5) 1.8 0.0018 E14.5 retina GTGGGCGTCT (2) 1.8 0.0018 E14.5 retina GTGGGGGTGT (2) 1.8 0.0018 E14.5 retina TCCCTCAAAA (3) 1.8 0.0018 E14.5 retina TCCCTCAGGT (2) 1.8 0.0018 E14.5 retina TGGGCGTGTA 1.8 0.0018 E16.5 retina GTGGGCGTGT (3) 86.9 0.0869 E16.5 retina TCGAGCAGTT 7.2 0.0072 E16.5 retina ATCATCCTGC (5) 5.4 0.0054 E16.5 retina CTGGGCGTGT (5) 3.6 0.0036 E16.5 retina GGTGGTGCCT (7) 3.6 0.0036 E16.5 retina TCCCTCAAAA (3) 3.6 0.0036 E16.5 retina GAGAAGCCTG (8) 1.8 0.0018 E16.5 retina GTGGGCGTGA (2) 1.8 0.0018 E16.5 retina TCCTATGAGC (2) 1.8 0.0018 E16.5 retina TGGGCGTGTA 1.8 0.0018 E18.5 retina GTGGGCGTGT (3) 47.3 0.0473 E18.5 retina TCGAGCAGTT 16.4 0.0164 E18.5 retina TCCCTCAAAA (3) 5.5 0.0055 E18.5 retina AGGGAAATAA (3) 3.6 0.0036 E18.5 retina GAGAAGCCTG (8) 1.8 0.0018 E18.5 retina GGTGGTGCCT (7) 1.8 0.0018 E18.5 retina TCCCTCAGGT (2) 1.8 0.0018 P0.5 retina GTGGGCGTGT (3) 109.9 0.1099 P0.5 retina CTGGGCGTGT (5) 17.7 0.0177 P0.5 retina TCGAGCAGTT 15.7 0.0157 P0.5 retina GTGGGCCGTG 3.9 0.0039 P0.5 retina AGGGAAATAA (3) 2 0.002 P0.5 retina ATCATCCTGC (5) 2 0.002 P0.5 retina GTGGGGGTGT (2) 2 0.002 P0.5 retina TCCCTCAAAA (3) 2 0.002 P0.5 retina TGGGCGTGTA 2 0.002 P2.5 retina GTGGGCGTGT (3) 44 0.044 P2.5 retina TCGAGCAGTT 10.6 0.0106 P2.5 retina AGGGAAATAA (3) 5.3 0.0053 P2.5 retina CTGGGCGTGT (5) 5.3 0.0053 P2.5 retina GGGCGGGGGG (11) 3.5 0.0035 P2.5 retina ATGAAAATGG (8) 1.8 0.0018 P2.5 retina CCAGGCCGGG (3) 1.8 0.0018 P2.5 retina GGTGGTGCCT (7) 1.8 0.0018 P2.5 retina TCCCTCAAAA (3) 1.8 0.0018 P4.5 retina GTGGGCGTGT (3) 23.8 0.0238 P4.5 retina TCGAGCAGTT 11.9 0.0119 P4.5 retina AGGGAAATAA (3) 7.9 0.0079 P4.5 retina CTGGGCGTGT (5) 5.9 0.0059 P4.5 retina ATCATCCTGC (5) 2 0.002 P4.5 retina TCCCTCAAAA (3) 2 0.002 P4.5 retina TGGGCGTGTA 2 0.002 P6.5 retina GTGGGCGTGT (3) 48.4 0.0484 P6.5 retina TCGAGCAGTT 11.7 0.0117 P6.5 retina CTGGGCGTGT (5) 5 0.005 P6.5 retina TCCCTCAAAA (3) 3.3 0.0033 P6.5 retina AGGGAAATAA (3) 1.7 0.0017 P6.5 retina GAGAAGCCTG (8) 1.7 0.0017 P6.5 retina GGTGGTGCCT (7) 1.7 0.0017 P10.5 crx- retina GTGGGCGTGT (3) 87.3 0.0873 P10.5 crx- retina GGGTGGCCCA (8) 50.2 0.0502 P10.5 crx- retina CTGGGCGTGT (5) 14.9 0.0149 P10.5 crx- retina AGGGAAATAA (3) 3.7 0.0037 P10.5 crx- retina GGTGGTGCCT (7) 3.7 0.0037 P10.5 crx- retina ATGAAAATGG (8) 1.9 0.0019 P10.5 crx- retina GAGAAGCCTG (8) 1.9 0.0019 P10.5 crx- retina GTGGGGGTGT (2) 1.9 0.0019 P10.5 crx+ retina GTGGGCGTGT (3) 59.6 0.0596 P10.5 crx+ retina GGGTGGCCCA (8) 57.7 0.0577 P10.5 crx+ retina CTGGGCGTGT (5) 9.6 0.0096 P10.5 crx+ retina TCCCTCAAAA (3) 3.8 0.0038 P10.5 crx+ retina TCCCTCAGGT (2) 3.8 0.0038 P10.5 crx+ retina TCGAGCAGTT 3.8 0.0038 P10.5 crx+ retina ATCATCCTCC (2) 1.9 0.0019 P10.5 crx+ retina GAGAAGCCTG (8) 1.9 0.0019 P10.5 crx+ retina TCCTATGAGC (2) 1.9 0.0019 Adult retinal GTGGGCGTGT (3) 63 0.063 Adult retinal CTGGGCGTGT (5) 11.1 0.0111 Adult retinal CCAGGCCGGG (3) 5.6 0.0056 Adult retinal TCGAGCAGTT 5.6 0.0056 Adult retinal GTGGGGGTGT (2) 3.7 0.0037 Adult retinal ATGAAAATGG (8) 1.9 0.0019 Adult retinal GAGAAGCCTG (8) 1.9 0.0019 Adult retinal GTGGGCCGTG 1.9 0.0019 Adult retinal GTGGGCGTGA (2) 1.9 0.0019 ONL GTGGGCGTGT (3) 93.9 0.0939 ONL GTGGGCGTCT (2) 9.6 0.0096 ONL CTGGGCGTGT (5) 5.7 0.0057 ONL GGGTGGCCCA (8) 5.7 0.0057 ONL GGTGGTGCCT (7) 5.7 0.0057 ONL TCGAGCAGTT 3.8 0.0038 ONL AGGGAAATAA (3) 1.9 0.0019 ONL TCCCTCAGGT (2) 1.9 0.0019