Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.65979	5730526G10Rik	RIKEN cDNA 5730526G10 gene	12		70656
Mm.65979	Strn3	striatin, calmodulin binding protein 3	12		94186
Gene Ontology	calmodulin binding
Human Homolog	STRN3[striatin, calmodulin binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGACAAAGG (5) 6.5 0.0065 P8 Cb GC TGTTTTGGAA (10) 4.9 0.0049 P8 Cb GC AACCAGGACT (6) 3.3 0.0033 P8 Cb GC TGATCTGCCT (6) 3.3 0.0033 P8 Cb GC ATTAAGACAA (2) 1.6 0.0016 Cb medulloblastoma TAGACAAAGG (5) 48.6 0.0486 Cb medulloblastoma TGTTTTGGAA (10) 16.2 0.0162 Cb medulloblastoma TGATCTGCCT (6) 9.2 0.0092 Cb medulloblastoma ATTAAGACAA (2) 6.9 0.0069 Cb medulloblastoma GTGTAGATGC (3) 4.6 0.0046 Cb medulloblastoma GTAGCCTTGA (5) 2.3 0.0023 P8 GC+1d culture TAGACAAAGG (5) 6.8 0.0068 P8 GC+1d culture TGTTTTGGAA (10) 3.4 0.0034 P8 GC+1d culture ATTAAGACAA (2) 2.3 0.0023 P8 GC+1d culture AACCAGGACT (6) 1.1 0.0011 P8 GC+1d culture GTAAATCAAG (2) 1.1 0.0011 P8 GC+1d culture TGATCTGCCT (6) 1.1 0.0011 P8 GC+SHH+1d culture TAGACAAAGG (5) 8.2 0.0082 P8 GC+SHH+1d culture TGTTTTGGAA (10) 7 0.007 P8 GC+SHH+1d culture GAATACCTAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AACCAGGACT (6) 1.2 0.0012 P8 GC+SHH+1d culture ATTAAGACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture ATTCCAAAAC (2) 1.2 0.0012 3T3 fibroblasts GTGTAGATGC (3) 24.5 0.0245 3T3 fibroblasts TGATCTGCCT (6) 17.5 0.0175 3T3 fibroblasts GTAGCCTTGA (5) 3.5 0.0035 3T3 fibroblasts TGTTTTGGAA (10) 3.5 0.0035 E15 cortex TGATCTGCCT (6) 19.8 0.0198 E15 cortex TGTTTTGGAA (10) 4.9 0.0049 P1 cortex ATTAAGACAA (2) 9.1 0.0091 P1 cortex CATCACACAA (4) 4.5 0.0045 P1 cortex GTGTAGATGC (3) 4.5 0.0045 Hypothalamus TAGACAAAGG (5) 39.8 0.0398 Hypothalamus TGTTTTGGAA (10) 9.1 0.0091 Hypothalamus TGATCTGCCT (6) 3.6 0.0036 E12.5 retina TGTTTTGGAA (10) 13.1 0.0131 E12.5 retina TAGACAAAGG (5) 3.8 0.0038 E12.5 retina TGATCTGCCT (6) 3.8 0.0038 E12.5 retina AACCAGGACT (6) 1.9 0.0019 E12.5 retina AAGGTGCAAG (4) 1.9 0.0019 E12.5 retina CATTACACAA (3) 1.9 0.0019 E12.5 retina GAATACCTAA (3) 1.9 0.0019 E14.5 retina TGTTTTGGAA (10) 21.9 0.0219 E14.5 retina TAGACAAAGG (5) 5.5 0.0055 E14.5 retina ATTAAGACAA (2) 3.6 0.0036 E14.5 retina ATTCCAAAAC (2) 1.8 0.0018 E14.5 retina CATCACACAA (4) 1.8 0.0018 E14.5 retina GTAGCCTTGA (5) 1.8 0.0018 E16.5 retina TGTTTTGGAA (10) 29 0.029 E16.5 retina TAGACAAAGG (5) 5.4 0.0054 E16.5 retina AACCAGGACT (6) 1.8 0.0018 E16.5 retina GAATACCTAA (3) 1.8 0.0018 E16.5 retina GTGTAGATGC (3) 1.8 0.0018 E16.5 retina TGATCTGCCT (6) 1.8 0.0018 E18.5 retina TGTTTTGGAA (10) 20 0.02 E18.5 retina ATTAAGACAA (2) 3.6 0.0036 E18.5 retina TAGACAAAGG (5) 3.6 0.0036 E18.5 retina AACCAGGACT (6) 1.8 0.0018 E18.5 retina AAGGTGCAAG (4) 1.8 0.0018 E18.5 retina TGATCTGCCT (6) 1.8 0.0018 P0.5 retina TGTTTTGGAA (10) 7.9 0.0079 P0.5 retina AACCAGGACT (6) 3.9 0.0039 P0.5 retina TAGACAAAGG (5) 3.9 0.0039 P0.5 retina TGATCTGCCT (6) 3.9 0.0039 P0.5 retina ATTAAGACAA (2) 2 0.002 P0.5 retina CATCACACAA (4) 2 0.002 P0.5 retina GAATACCTAA (3) 2 0.002 P2.5 retina TGTTTTGGAA (10) 14.1 0.0141 P2.5 retina TAGACAAAGG (5) 8.8 0.0088 P2.5 retina AACCAGGACT (6) 1.8 0.0018 P2.5 retina TGATCTGCCT (6) 1.8 0.0018 P4.5 retina TGTTTTGGAA (10) 25.8 0.0258 P4.5 retina TAGACAAAGG (5) 11.9 0.0119 P4.5 retina AACCAGGACT (6) 2 0.002 P4.5 retina ATTAAGACAA (2) 2 0.002 P4.5 retina CATCACACAA (4) 2 0.002 P4.5 retina CATTACACAA (3) 2 0.002 P6.5 retina TAGACAAAGG (5) 11.7 0.0117 P6.5 retina ATTAAGACAA (2) 8.3 0.0083 P6.5 retina TGTTTTGGAA (10) 6.7 0.0067 P6.5 retina TGATCTGCCT (6) 5 0.005 P6.5 retina AACCAGGACT (6) 1.7 0.0017 P6.5 retina GTGTAGATGC (3) 1.7 0.0017 P10.5 crx- retina TGTTTTGGAA (10) 20.4 0.0204 P10.5 crx- retina TAGACAAAGG (5) 13 0.013 P10.5 crx- retina TGATCTGCCT (6) 5.6 0.0056 P10.5 crx- retina AACCAGGACT (6) 1.9 0.0019 P10.5 crx- retina ATTCCAAAAC (2) 1.9 0.0019 P10.5 crx- retina CATCACACAA (4) 1.9 0.0019 P10.5 crx+ retina TAGACAAAGG (5) 21.1 0.0211 P10.5 crx+ retina TGTTTTGGAA (10) 7.7 0.0077 Adult retinal TAGACAAAGG (5) 13 0.013 Adult retinal TGTTTTGGAA (10) 5.6 0.0056 Adult retinal AACCAGGACT (6) 3.7 0.0037 Adult retinal AAGGTGCAAG (4) 1.9 0.0019 Adult retinal CATCACACAA (4) 1.9 0.0019 Adult retinal GTGTAGATGC (3) 1.9 0.0019 ONL TAGACAAAGG (5) 7.7 0.0077 ONL GTAAATCAAG (2) 1.9 0.0019 ONL TGTTTTGGAA (10) 1.9 0.0019