Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.73276	5830401L18Rik	RIKEN cDNA 5830401L18 gene	2		319222
Mm.73276	Stau1	staufen (RNA binding protein) homolog 1 (Drosophila)	2		20853
Gene Ontology	double-stranded RNA binding | intracellular | mRNA localization, intracellular | protein binding | ribonucleoprotein complex | RNA binding
Human Homolog	STAU[staufen, RNA binding protein (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCCCCTC (4) 3.3 0.0033 P8 Cb GC CTGGCTTCTT (7) 3.3 0.0033 P8 Cb GC ACTGACTCAG (2) 1.6 0.0016 P8 Cb GC CCGCTGATCC (2) 1.6 0.0016 Cb medulloblastoma AAACCCCCTC (4) 4.6 0.0046 Cb medulloblastoma GAATATAAGT (2) 2.3 0.0023 P8 GC+1d culture AAACCCCCTC (4) 17.1 0.0171 P8 GC+1d culture CTGGCTTCTT (7) 4.6 0.0046 P8 GC+1d culture GAATATAAGT (2) 4.6 0.0046 P8 GC+1d culture TCTCCCTGCC (3) 4.6 0.0046 P8 GC+1d culture CAGAACATTA (2) 3.4 0.0034 P8 GC+1d culture CCGCTGATCC (2) 2.3 0.0023 P8 GC+1d culture TAACTGGCAA (3) 2.3 0.0023 P8 GC+1d culture CTATGGTGTG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAACCCCCTC (4) 14.1 0.0141 P8 GC+SHH+1d culture CTGGCTTCTT (7) 9.4 0.0094 P8 GC+SHH+1d culture CCGCTGATCC (2) 4.7 0.0047 P8 GC+SHH+1d culture GAATATAAGT (2) 4.7 0.0047 P8 GC+SHH+1d culture TCTCCCTGCC (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAATTGGCT (8) 1.2 0.0012 P8 GC+SHH+1d culture AGTGGGAAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CAGAACATTA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTATGGTGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAAATGGTG (4) 1.2 0.0012 3T3 fibroblasts CCGCTGATCC (2) 21 0.021 3T3 fibroblasts CTGGCTTCTT (7) 17.5 0.0175 3T3 fibroblasts TCTCCCTGCC (3) 7 0.007 3T3 fibroblasts CTATGGTGTG (2) 3.5 0.0035 E15 cortex GAATATAAGT (2) 4.9 0.0049 P1 cortex CTGGCTTCTT (7) 36.4 0.0364 P1 cortex AAACCCCCTC (4) 4.5 0.0045 P1 cortex CCGCTGATCC (2) 4.5 0.0045 Hypothalamus GAATATAAGT (2) 3.6 0.0036 E12.5 retina AAACCCCCTC (4) 11.3 0.0113 E12.5 retina GAATATAAGT (2) 7.5 0.0075 E12.5 retina ACTGACTCAG (2) 3.8 0.0038 E12.5 retina AAAATTGGCT (8) 1.9 0.0019 E12.5 retina CTGGCTTCTT (7) 1.9 0.0019 E12.5 retina CTGGGCTTCT (4) 1.9 0.0019 E14.5 retina AAACCCCCTC (4) 5.5 0.0055 E14.5 retina GAATATAAGT (2) 5.5 0.0055 E14.5 retina ACTGACTCAG (2) 1.8 0.0018 E14.5 retina AGTGGGAAGG (2) 1.8 0.0018 E14.5 retina CAGAACATTA (2) 1.8 0.0018 E14.5 retina CTGGCTTCTT (7) 1.8 0.0018 E14.5 retina GAAAATGGTG (4) 1.8 0.0018 E16.5 retina AAACCCCCTC (4) 9.1 0.0091 E16.5 retina GAATATAAGT (2) 5.4 0.0054 E16.5 retina AAAATTGGCT (8) 3.6 0.0036 E16.5 retina TCTCCCTGCC (3) 3.6 0.0036 E16.5 retina ACTGACTCAG (2) 1.8 0.0018 E18.5 retina AAACCCCCTC (4) 7.3 0.0073 E18.5 retina CAGAACATTA (2) 7.3 0.0073 E18.5 retina AAAATTGGCT (8) 1.8 0.0018 E18.5 retina AGTGGGAAGG (2) 1.8 0.0018 E18.5 retina CTGGCTTCTT (7) 1.8 0.0018 E18.5 retina CTGGGCTTCT (4) 1.8 0.0018 E18.5 retina GAAAATGGTG (4) 1.8 0.0018 E18.5 retina GAATATAAGT (2) 1.8 0.0018 P0.5 retina CTGGCTTCTT (7) 11.8 0.0118 P0.5 retina AAACCCCCTC (4) 5.9 0.0059 P0.5 retina CAGAACATTA (2) 3.9 0.0039 P0.5 retina CCGCTGATCC (2) 3.9 0.0039 P0.5 retina CTATGGTGTG (2) 3.9 0.0039 P0.5 retina GAATATAAGT (2) 3.9 0.0039 P0.5 retina ACTGACTCAG (2) 2 0.002 P0.5 retina GAAAATGGTG (4) 2 0.002 P0.5 retina TCTCCCTGCC (3) 2 0.002 P2.5 retina AAACCCCCTC (4) 14.1 0.0141 P2.5 retina GAATATAAGT (2) 8.8 0.0088 P2.5 retina CTGGCTTCTT (7) 7 0.007 P2.5 retina ACTGACTCAG (2) 3.5 0.0035 P2.5 retina TCTCCCTGCC (3) 3.5 0.0035 P2.5 retina AAAATTGGCT (8) 1.8 0.0018 P2.5 retina AGTGGGAAGG (2) 1.8 0.0018 P2.5 retina CAGAACATTA (2) 1.8 0.0018 P4.5 retina GAATATAAGT (2) 13.9 0.0139 P4.5 retina AAACCCCCTC (4) 5.9 0.0059 P4.5 retina CTGGCTTCTT (7) 4 0.004 P4.5 retina AGTGGGAAGG (2) 2 0.002 P4.5 retina CTATGGTGTG (2) 2 0.002 P4.5 retina TAACTGGCAA (3) 2 0.002 P4.5 retina TCTCCCTGCC (3) 2 0.002 P6.5 retina GAATATAAGT (2) 5 0.005 P6.5 retina AAACCCCCTC (4) 3.3 0.0033 P6.5 retina AGTGGGAAGG (2) 3.3 0.0033 P6.5 retina CCGCTGATCC (2) 3.3 0.0033 P6.5 retina CTGGCTTCTT (7) 3.3 0.0033 P6.5 retina CAGAACATTA (2) 1.7 0.0017 P10.5 crx- retina AAACCCCCTC (4) 9.3 0.0093 P10.5 crx- retina ACTGACTCAG (2) 1.9 0.0019 P10.5 crx- retina CCGCTGATCC (2) 1.9 0.0019 P10.5 crx- retina CTGGGCTTCT (4) 1.9 0.0019 P10.5 crx- retina GAATATAAGT (2) 1.9 0.0019 P10.5 crx- retina TCTCCCTGCC (3) 1.9 0.0019 P10.5 crx+ retina TCTCCCTGCC (3) 5.8 0.0058 P10.5 crx+ retina GAATATAAGT (2) 3.8 0.0038 P10.5 crx+ retina AAACCCCCTC (4) 1.9 0.0019 Adult retinal AAACCCCCTC (4) 9.3 0.0093 Adult retinal TCTCCCTGCC (3) 7.4 0.0074 Adult retinal CTGGCTTCTT (7) 3.7 0.0037 Adult retinal CCGCTGATCC (2) 1.9 0.0019 Adult retinal GAATATAAGT (2) 1.9 0.0019 ONL AAACCCCCTC (4) 5.7 0.0057 ONL CCGCTGATCC (2) 5.7 0.0057 ONL AAAATTGGCT (8) 1.9 0.0019 ONL GAATATAAGT (2) 1.9 0.0019