Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7978	3222402N08Rik	RIKEN cDNA 3222402N08 gene	17		74021
Mm.7978	C530014P21Rik	RIKEN cDNA C530014P21 gene	17		399604
Mm.7978	3110005L21Rik	RIKEN cDNA 3110005L21 gene	17		73104
Mm.7978	6430537K16Rik	RIKEN cDNA 6430537K16 gene	17		320480
Mm.7978	Efna5	ephrin A5	17	17 33.5 cM	13640
Gene Ontology	development | extracellular space | membrane | neurogenesis
Human Homolog	EFNA5[ephrin-A5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGGGAA (9) 1.6 0.0016 P8 Cb GC CCACCAATTA (5) 1.6 0.0016 Cb medulloblastoma GTGAACTGTA (6) 2.3 0.0023 Cb medulloblastoma GTGAATTTTG (11) 2.3 0.0023 P8 GC+1d culture TGGTTTGAAA (5) 1.1 0.0011 E15 cortex AAGCAGGGAA (9) 4.9 0.0049 E15 cortex GTGAATTTTG (11) 4.9 0.0049 P1 cortex GTGAACTGTA (6) 4.5 0.0045 Hypothalamus AAGCAGGGAA (9) 1.8 0.0018 Hypothalamus GTGAACTGTA (6) 1.8 0.0018 E12.5 retina AAGCAGGGAA (9) 1.9 0.0019 E12.5 retina CCACCAATTA (5) 1.9 0.0019 E12.5 retina GTGAACTGTA (6) 1.9 0.0019 E16.5 retina CCACCAATTA (5) 1.8 0.0018 E18.5 retina AAGCAGGGAA (9) 1.8 0.0018 E18.5 retina ATCGTGTTTC (7) 1.8 0.0018 E18.5 retina CCACCAATTA (5) 1.8 0.0018 P0.5 retina TGGTTTGAAA (5) 3.9 0.0039 P0.5 retina CCACCAATTA (5) 2 0.002 P2.5 retina ATCGTGTTTC (7) 1.8 0.0018 P2.5 retina GTGAATTTTG (11) 1.8 0.0018 P4.5 retina CCACCAATTA (5) 2 0.002 P6.5 retina CCACCAATTA (5) 1.7 0.0017 P10.5 crx- retina AAGCAGGGAA (9) 1.9 0.0019 Adult retinal ATCGTGTTTC (7) 1.9 0.0019