Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86410	C76680	expressed sequence C76680	5		97203
Mm.86410	Phtf2	putative homeodomain transcription factor 2	5		68770
Gene Ontology	nucleus
Human Homolog	PHTF2[putative homeodomain transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGGATGT (3) 4.9 0.0049 Cb medulloblastoma TTTTGGATGT (3) 6.9 0.0069 P8 GC+1d culture AATGTAAGAA (2) 1.1 0.0011 P8 GC+1d culture TGAACACAGA (4) 1.1 0.0011 P8 GC+1d culture TTTTGGATGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGGATGT (3) 3.5 0.0035 P8 GC+SHH+1d culture TGAACACAGA (4) 2.3 0.0023 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TTTTGGATGT (3) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 Hypothalamus TTTTGGATGT (3) 5.4 0.0054 E14.5 retina TTTTGGATGT (3) 3.6 0.0036 E14.5 retina TGGACAGAAC (2) 1.8 0.0018 E16.5 retina TTTTGGATGT (3) 5.4 0.0054 E18.5 retina TTTTGGATGT (3) 3.6 0.0036 E18.5 retina AATGTAAGAA (2) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATGTAAGAA (2) 2 0.002 P0.5 retina TTTTGGATGT (3) 2 0.002 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGGACAGAAC (2) 1.8 0.0018 P4.5 retina AATGTAAGAA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTTTGGATGT (3) 2 0.002 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGGACAGAAC (2) 1.7 0.0017 P6.5 retina TTTTGGATGT (3) 1.7 0.0017 P10.5 crx- retina AATGTAAGAA (2) 1.9 0.0019 P10.5 crx- retina TTTTGGATGT (3) 1.9 0.0019 P10.5 crx+ retina TTTTGGATGT (3) 3.8 0.0038 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTTTGGATGT (3) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057