Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.86410	C76680	expressed sequence C76680	5		97203
Mm.86410	Phtf2	putative homeodomain transcription factor 2	5		68770
Gene Ontology	nucleus
Human Homolog	PHTF2[putative homeodomain transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGGATGT 4.9 0.0049 Cb medulloblastoma TTTTGGATGT 6.9 0.0069 P8 GC+1d culture AATGTAAGAA (2) TGAACACAGA TTTTGGATGT 3.3 0.0033 P8 GC+SHH+1d culture TGAACACAGA TTTTGGATGT 5.8 0.0058 3T3 fibroblasts GTCATAGCTG (2) TTTTGGATGT 14 0.014 E15 cortex GTCATAGCTG (2) 4.9 0.0049 Hypothalamus TTTTGGATGT 5.4 0.0054 E14.5 retina TGGACAGAAC (2) TTTTGGATGT 5.4 0.0054 E16.5 retina TTTTGGATGT 5.4 0.0054 E18.5 retina AATGTAAGAA (2) TTTTGGATGT 5.4 0.0054 P0.5 retina AATGTAAGAA (2) GTCATAGCTG (2) TTTTGGATGT 7.9 0.0079 P2.5 retina GTCATAGCTG (2) TGGACAGAAC (2) 3.6 0.0036 P4.5 retina AATGTAAGAA (2) GTCATAGCTG (2) TTTTGGATGT 6 0.006 P6.5 retina GTCATAGCTG (2) TGGACAGAAC (2) TTTTGGATGT 6.7 0.0067 P10.5 crx- retina AATGTAAGAA (2) TTTTGGATGT 3.8 0.0038 P10.5 crx+ retina TTTTGGATGT 3.8 0.0038 Adult retinal GTCATAGCTG (2) TTTTGGATGT 3.8 0.0038 ONL GTCATAGCTG (2) 5.7 0.0057