Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8924	AU022875	expressed sequence AU022875	16		106342
Mm.8924	A130034M23Rik	RIKEN cDNA A130034M23 gene	16		320759
Mm.8924	Gm542	gene model 542, (NCBI)	16		224087
Human Homolog	AFURS1[ATPase family homolog up-regulated in senescence cells]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGACAGA (5) 9.8 0.0098 P8 Cb GC AAATTAATAA (5) 1.6 0.0016 P8 Cb GC CACTGTTGAG (4) 1.6 0.0016 P8 Cb GC GGAAACAAAA (11) 1.6 0.0016 P8 Cb GC TAAATGCTTA (4) 1.6 0.0016 Cb medulloblastoma GGTCCTGCTT (5) 4.6 0.0046 Cb medulloblastoma TAAATGCTTA (4) 4.6 0.0046 Cb medulloblastoma TGCTGACAGA (5) 4.6 0.0046 Cb medulloblastoma CACTGTTGAG (4) 2.3 0.0023 Cb medulloblastoma CAGTTTTGTT (6) 2.3 0.0023 Cb medulloblastoma GGAAACAAAA (11) 2.3 0.0023 Cb medulloblastoma TGCACATAAT (3) 2.3 0.0023 P8 GC+1d culture CACTGTTGAG (4) 11.4 0.0114 P8 GC+1d culture TGCTGACAGA (5) 5.7 0.0057 P8 GC+1d culture AAATTAATAA (5) 1.1 0.0011 P8 GC+SHH+1d culture CACTGTTGAG (4) 8.2 0.0082 P8 GC+SHH+1d culture TGCTGACAGA (5) 5.9 0.0059 P8 GC+SHH+1d culture GGTCCTGCTT (5) 1.2 0.0012 P8 GC+SHH+1d culture TAAATGCTTA (4) 1.2 0.0012 3T3 fibroblasts TGCTGACAGA (5) 10.5 0.0105 3T3 fibroblasts GGTCCTGCTT (5) 7 0.007 E15 cortex CACTGTTGAG (4) 24.7 0.0247 P1 cortex CACTGTTGAG (4) 13.6 0.0136 P1 cortex TGCTGACAGA (5) 13.6 0.0136 P1 cortex GGAAACAAAA (11) 4.5 0.0045 Hypothalamus CACTGTTGAG (4) 3.6 0.0036 Hypothalamus AAATTAATAA (5) 1.8 0.0018 Hypothalamus TGCTGACAGA (5) 1.8 0.0018 E12.5 retina TGCTGACAGA (5) 7.5 0.0075 E12.5 retina TAATATGTGT (6) 3.8 0.0038 E12.5 retina AAATTAATAA (5) 1.9 0.0019 E14.5 retina TGCTGACAGA (5) 5.5 0.0055 E14.5 retina CAGTTTTGTT (6) 1.8 0.0018 E14.5 retina TGCACATAAT (3) 1.8 0.0018 E16.5 retina TGCTGACAGA (5) 10.9 0.0109 E16.5 retina AAATTAATAA (5) 1.8 0.0018 E16.5 retina GGAAACAAAA (11) 1.8 0.0018 E16.5 retina TAATATGTGT (6) 1.8 0.0018 E18.5 retina CACTGTTGAG (4) 3.6 0.0036 E18.5 retina GGAAACAAAA (11) 3.6 0.0036 P0.5 retina CACTGTTGAG (4) 9.8 0.0098 P0.5 retina TGCTGACAGA (5) 5.9 0.0059 P0.5 retina AAATTAATAA (5) 2 0.002 P0.5 retina TAATATGTGT (6) 2 0.002 P2.5 retina TAATATGTGT (6) 7 0.007 P2.5 retina CACTGTTGAG (4) 3.5 0.0035 P2.5 retina TGCTGACAGA (5) 3.5 0.0035 P2.5 retina TGCACATAAT (3) 1.8 0.0018 P4.5 retina TGCTGACAGA (5) 5.9 0.0059 P4.5 retina TGCACATAAT (3) 4 0.004 P4.5 retina CACTGTTGAG (4) 2 0.002 P4.5 retina TAATATGTGT (6) 2 0.002 P6.5 retina TGCTGACAGA (5) 16.7 0.0167 P6.5 retina CACTGTTGAG (4) 3.3 0.0033 P6.5 retina TAATATGTGT (6) 3.3 0.0033 P6.5 retina CAGTTTTGTT (6) 1.7 0.0017 P6.5 retina TAAATGCCCA (3) 1.7 0.0017 P6.5 retina TAAATGCTTA (4) 1.7 0.0017 P10.5 crx- retina TGCTGACAGA (5) 13 0.013 P10.5 crx- retina CACTGTTGAG (4) 1.9 0.0019 P10.5 crx- retina TAAATGCCCA (3) 1.9 0.0019 P10.5 crx- retina TAATATGTGT (6) 1.9 0.0019 P10.5 crx+ retina TGCTGACAGA (5) 7.7 0.0077 P10.5 crx+ retina CACTGTTGAG (4) 1.9 0.0019 P10.5 crx+ retina TAAATGCCCA (3) 1.9 0.0019 Adult retinal TGCTGACAGA (5) 9.3 0.0093 ONL TAATATGTGT (6) 3.8 0.0038 ONL TGCTGACAGA (5) 3.8 0.0038 ONL AAATTAATAA (5) 1.9 0.0019 ONL CAGTTTTGTT (6) 1.9 0.0019 ONL GGTCCTGCTT (5) 1.9 0.0019 ONL TAAATGCTTA (4) 1.9 0.0019