Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.9002
Ube3a
ubiquitin protein ligase E3A
7
7 28.65 cM
22215
Mm.9002
5830462N02Rik
RIKEN cDNA 5830462N02 gene
7
76097
Mm.9002
A130086L21Rik
RIKEN cDNA A130086L21 gene
7
320572
Mm.9002
C230091D08Rik
RIKEN cDNA C230091D08 gene
7
330544
Mm.9002
9330162G02Rik
RIKEN cDNA 9330162G02 gene
7
319534
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 128 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGTAAACAA
(
5
)
6.5
0.0065
P8 Cb GC
ATTCATTTGA (
6
)
4.9
0.0049
P8 Cb GC
CCTTTAATCT (
38
)
4.9
0.0049
P8 Cb GC
AAGAGAAAAA (
19
)
3.3
0.0033
P8 Cb GC
ACCATTAACT
(
5
)
3.3
0.0033
P8 Cb GC
CCTTTAATTT (
19
)
1.6
0.0016
P8 Cb GC
CTGTTTTAAA
(
6
)
1.6
0.0016
Cb medulloblastoma
ACCATTAACT
(
5
)
11.6
0.0116
Cb medulloblastoma
AAGAGAAAAA (
19
)
2.3
0.0023
Cb medulloblastoma
CTGTTTTAAA
(
6
)
2.3
0.0023
Cb medulloblastoma
TGGCAAATGC
(
7
)
2.3
0.0023
Cb medulloblastoma
TTCATTTTTA (
7
)
2.3
0.0023
P8 GC+1d culture
CTGTAAACAA
(
5
)
3.4
0.0034
P8 GC+1d culture
TTAATGTGAA (
6
)
3.4
0.0034
P8 GC+1d culture
AAGAGAAAAA (
19
)
2.3
0.0023
P8 GC+1d culture
ATTCATTTGA (
6
)
2.3
0.0023
P8 GC+1d culture
ACCATTAACT
(
5
)
1.1
0.0011
P8 GC+1d culture
CCTTTAATCT (
38
)
1.1
0.0011
P8 GC+1d culture
GTTGTATACA
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGAGAAAAA (
19
)
3.5
0.0035
P8 GC+SHH+1d culture
ACCATTAACT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CCTTTAATCT (
38
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGTAAACAA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGTAACCAA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
ATTCATTTGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCAAATGC
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCATTTTTA (
7
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCT (
38
)
10.5
0.0105
3T3 fibroblasts
ACCATTAACT
(
5
)
3.5
0.0035
3T3 fibroblasts
GGGAATTGGG (
10
)
3.5
0.0035
E15 cortex
ACAGTGGGGC
(
5
)
4.9
0.0049
E15 cortex
ATTCATTTGA (
6
)
4.9
0.0049
E15 cortex
TGGCAAATGC
(
7
)
4.9
0.0049
P1 cortex
ACCATTAACT
(
5
)
4.5
0.0045
P1 cortex
CCTTTAATCT (
38
)
4.5
0.0045
P1 cortex
TGGCAAATGC
(
7
)
4.5
0.0045
P1 cortex
TTAATGTGAA (
6
)
4.5
0.0045
Hypothalamus
ACCATTAACT
(
5
)
12.7
0.0127
Hypothalamus
ATTCATTTGA (
6
)
7.2
0.0072
Hypothalamus
TTAATGTGAA (
6
)
5.4
0.0054
Hypothalamus
CTGTTTTAAA
(
6
)
3.6
0.0036
Hypothalamus
ACAGTGGGGC
(
5
)
1.8
0.0018
Hypothalamus
CCTTTAATCT (
38
)
1.8
0.0018
Hypothalamus
CTGTAAACAA
(
5
)
1.8
0.0018
Hypothalamus
GGGAATTGGG (
10
)
1.8
0.0018
E12.5 retina
ACCATTAACT
(
5
)
9.4
0.0094
E12.5 retina
ATTCATTTGA (
6
)
1.9
0.0019
E12.5 retina
CCTTTAATCT (
38
)
1.9
0.0019
E12.5 retina
GTTGTATACA
(
5
)
1.9
0.0019
E14.5 retina
CCTTTAATCT (
38
)
12.8
0.0128
E14.5 retina
ATTCATTTGA (
6
)
7.3
0.0073
E14.5 retina
ACCATTAACT
(
5
)
5.5
0.0055
E14.5 retina
AATTTATTTT
(
9
)
1.8
0.0018
E14.5 retina
CTGTAAACAA
(
5
)
1.8
0.0018
E14.5 retina
CTGTTTTAAA
(
6
)
1.8
0.0018
E14.5 retina
GGGAATTGGG (
10
)
1.8
0.0018
E14.5 retina
TGGCAAATGC
(
7
)
1.8
0.0018
E14.5 retina
TTAATGTGAA (
6
)
1.8
0.0018
E16.5 retina
ACCATTAACT
(
5
)
10.9
0.0109
E16.5 retina
ATTCATTTGA (
6
)
10.9
0.0109
E16.5 retina
CTGTAAACAA
(
5
)
3.6
0.0036
E16.5 retina
AAGAGAAAAA (
19
)
1.8
0.0018
E16.5 retina
GGGAATTGGG (
10
)
1.8
0.0018
E16.5 retina
TTAATGTGAA (
6
)
1.8
0.0018
E18.5 retina
ATTCATTTGA (
6
)
7.3
0.0073
E18.5 retina
ACCATTAACT
(
5
)
3.6
0.0036
E18.5 retina
TTAATGTGAA (
6
)
3.6
0.0036
E18.5 retina
AAACTTTCAA (
12
)
1.8
0.0018
E18.5 retina
AAGAGAAAAA (
19
)
1.8
0.0018
E18.5 retina
AATTTATTTT
(
9
)
1.8
0.0018
E18.5 retina
CTGTAAACAA
(
5
)
1.8
0.0018
E18.5 retina
CTGTTTTAAA
(
6
)
1.8
0.0018
E18.5 retina
GGGAATTGGG (
10
)
1.8
0.0018
E18.5 retina
TGGCAAATGC
(
7
)
1.8
0.0018
E18.5 retina
TTTTCAATGG (
7
)
1.8
0.0018
P0.5 retina
ATTCATTTGA (
6
)
5.9
0.0059
P0.5 retina
TTAATGTGAA (
6
)
3.9
0.0039
P0.5 retina
ACAGTGGGGC
(
5
)
2
0.002
P0.5 retina
ACCATTAACT
(
5
)
2
0.002
P0.5 retina
CCTTTAATCT (
38
)
2
0.002
P0.5 retina
TTTTCAATGG (
7
)
2
0.002
P2.5 retina
GGGAATTGGG (
10
)
7
0.007
P2.5 retina
ATTCATTTGA (
6
)
3.5
0.0035
P2.5 retina
CCTTTAATCT (
38
)
3.5
0.0035
P2.5 retina
CTGTAAACAA
(
5
)
1.8
0.0018
P2.5 retina
TTAATGTGAA (
6
)
1.8
0.0018
P2.5 retina
TTTTCAATGG (
7
)
1.8
0.0018
P4.5 retina
ATTCATTTGA (
6
)
7.9
0.0079
P4.5 retina
ACCATTAACT
(
5
)
5.9
0.0059
P4.5 retina
CCTTTAATCT (
38
)
4
0.004
P4.5 retina
GGGAATTGGG (
10
)
4
0.004
P4.5 retina
TTTTCAATGG (
7
)
4
0.004
P4.5 retina
AAGAGAAAAA (
19
)
2
0.002
P4.5 retina
TTAATGTGAA (
6
)
2
0.002
P6.5 retina
CCTTTAATCT (
38
)
11.7
0.0117
P6.5 retina
ATTCATTTGA (
6
)
6.7
0.0067
P6.5 retina
AAACTTTCAA (
12
)
3.3
0.0033
P6.5 retina
CTGTTTTAAA
(
6
)
1.7
0.0017
P6.5 retina
GGGAATTGGG (
10
)
1.7
0.0017
P6.5 retina
TGGCAAATGC
(
7
)
1.7
0.0017
P6.5 retina
TTAATGTGAA (
6
)
1.7
0.0017
P6.5 retina
TTCATTTTTA (
7
)
1.7
0.0017
P10.5 crx- retina
ACCATTAACT
(
5
)
24.2
0.0242
P10.5 crx- retina
CCTTTAATTT (
19
)
3.7
0.0037
P10.5 crx- retina
AAGAGAAAAA (
19
)
1.9
0.0019
P10.5 crx- retina
AATTTATTTT
(
9
)
1.9
0.0019
P10.5 crx- retina
GGGAATTGGG (
10
)
1.9
0.0019
P10.5 crx- retina
TGGCAAATGC
(
7
)
1.9
0.0019
P10.5 crx- retina
TTAATGTGAA (
6
)
1.9
0.0019
P10.5 crx- retina
TTTTCAATGG (
7
)
1.9
0.0019
P10.5 crx+ retina
CTGTAAACAA
(
5
)
3.8
0.0038
P10.5 crx+ retina
GGGAATTGGG (
10
)
3.8
0.0038
P10.5 crx+ retina
ACCATTAACT
(
5
)
1.9
0.0019
P10.5 crx+ retina
ATTCATTTGA (
6
)
1.9
0.0019
P10.5 crx+ retina
TGGCAAATGC
(
7
)
1.9
0.0019
P10.5 crx+ retina
TTAATGTGAA (
6
)
1.9
0.0019
Adult retinal
CCTTTAATCT (
38
)
7.4
0.0074
Adult retinal
ACCATTAACT
(
5
)
3.7
0.0037
Adult retinal
ATTCATTTGA (
6
)
3.7
0.0037
Adult retinal
CTGTAAACAA
(
5
)
1.9
0.0019
Adult retinal
GTTGTATACA
(
5
)
1.9
0.0019
Adult retinal
TGGCAAATGC
(
7
)
1.9
0.0019
Adult retinal
TTAATGTGAA (
6
)
1.9
0.0019
ONL
CCTTTAATCT (
38
)
11.5
0.0115
ONL
ACCATTAACT
(
5
)
5.7
0.0057
ONL
ATTCATTTGA (
6
)
1.9
0.0019
ONL
TTAATGTGAA (
6
)
1.9
0.0019
ONL
TTCATTTTTA (
7
)
1.9
0.0019
