Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.90787	Ngfrap1	nerve growth factor receptor (TNFRSF16) associated protein 1	X	X 57.5 cM	12070
Gene Ontology	cytosol | death receptor binding | induction of apoptosis | induction of apoptosis via death domain receptors | receptor activity
Human Homolog	NGFRAP1[nerve growth factor receptor (TNFRSF16) associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAGCAATG 26.1 0.0261 P8 Cb GC TGCCAGGGTG (4) 6.5 0.0065 P8 Cb GC CCCTGTGCCC (3) 1.6 0.0016 Cb medulloblastoma GAAAGCAATG 16.2 0.0162 Cb medulloblastoma GGAAAGGCAA (7) 6.9 0.0069 Cb medulloblastoma GAGGAGATGA (3) 4.6 0.0046 Cb medulloblastoma TGCCAGGTGG (2) 2.3 0.0023 P8 GC+1d culture GAAAGCAATG 41.1 0.0411 P8 GC+1d culture GGAAAGGCAA (7) 10.3 0.0103 P8 GC+1d culture TGCCAGGGTG (4) 2.3 0.0023 P8 GC+1d culture GAGGAGATGA (3) 1.1 0.0011 P8 GC+1d culture GCCAATGTCC (4) 1.1 0.0011 P8 GC+SHH+1d culture GAAAGCAATG 39.8 0.0398 P8 GC+SHH+1d culture GGAAAGGCAA (7) 7 0.007 P8 GC+SHH+1d culture TGCCAGGGTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGTTGTCTCT (4) 1.2 0.0012 3T3 fibroblasts GGTTGTCTCT (4) 3.5 0.0035 3T3 fibroblasts GTGCAGGTGG 3.5 0.0035 E15 cortex GAAAGCAATG 14.8 0.0148 E15 cortex GTGCAGGTGG 4.9 0.0049 P1 cortex GAAACCAATG (8) 4.5 0.0045 P1 cortex GAAAGCAATG 4.5 0.0045 P1 cortex GGTTGTCTCT (4) 4.5 0.0045 Hypothalamus GAAAGCAATG 48.9 0.0489 Hypothalamus TGCCAGGGTG (4) 9.1 0.0091 Hypothalamus GTGATCGTGG (2) 3.6 0.0036 Hypothalamus ATGAATTCTG (2) 1.8 0.0018 Hypothalamus GGAAAGGCAA (7) 1.8 0.0018 Hypothalamus TGCCAGGTGG (2) 1.8 0.0018 E12.5 retina GAAAGCAATG 65.7 0.0657 E12.5 retina GGAAAGGCAA (7) 1.9 0.0019 E14.5 retina GAAAGCAATG 60.1 0.0601 E14.5 retina GGTTGTCTCT (4) 3.6 0.0036 E14.5 retina ATGAATTCTG (2) 1.8 0.0018 E14.5 retina TGCCAGGTGG (2) 1.8 0.0018 E16.5 retina GAAAGCAATG 50.7 0.0507 E16.5 retina TGCCAGGGTG (4) 25.4 0.0254 E16.5 retina GCCAATGTCC (4) 7.2 0.0072 E16.5 retina ATGAATTCTG (2) 1.8 0.0018 E16.5 retina CCCTGTGCCC (3) 1.8 0.0018 E16.5 retina TGCCAGGTGG (2) 1.8 0.0018 E18.5 retina GAAAGCAATG 65.5 0.0655 E18.5 retina ATGAATTCTG (2) 1.8 0.0018 E18.5 retina GGTTGTCTCT (4) 1.8 0.0018 P0.5 retina GAAAGCAATG 21.6 0.0216 P0.5 retina TGCCAGGGTG (4) 2 0.002 P2.5 retina GAAAGCAATG 49.3 0.0493 P2.5 retina GGTTGTCTCT (4) 1.8 0.0018 P4.5 retina GAAAGCAATG 33.7 0.0337 P4.5 retina GAAACCAATG (8) 2 0.002 P4.5 retina GTGATCGTGG (2) 2 0.002 P6.5 retina GAAAGCAATG 48.4 0.0484 P6.5 retina GCCAATGTCC (4) 1.7 0.0017 P10.5 crx- retina GAAAGCAATG 31.6 0.0316 P10.5 crx- retina TGCCAGGGTG (4) 3.7 0.0037 P10.5 crx- retina CCCTGTGCCC (3) 1.9 0.0019 P10.5 crx- retina GGTTGTCTCT (4) 1.9 0.0019 P10.5 crx- retina TGCCAGGTGG (2) 1.9 0.0019 P10.5 crx+ retina GAAAGCAATG 44.2 0.0442 P10.5 crx+ retina GAAACCAATG (8) 1.9 0.0019 P10.5 crx+ retina TGCCAGGGTG (4) 1.9 0.0019 Adult retinal GAAAGCAATG 9.3 0.0093 Adult retinal GAGGAGATGA (3) 1.9 0.0019 Adult retinal GGTTGTCTCT (4) 1.9 0.0019 Adult retinal GTGCAGGTGG 1.9 0.0019 ONL GAAAGCAATG 5.7 0.0057 ONL GGTTGTCTCT (4) 1.9 0.0019