Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.945	9230118N17Rik	RIKEN cDNA 9230118N17 gene	7		77751
Mm.945	Ptpre	protein tyrosine phosphatase, receptor type, E	7	7 67.6 cM	19267
Gene Ontology	extracellular space | hydrolase activity | integral to membrane | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein homodimerization activity | protein-tyrosine-phosphatase activity | protein-tyrosine-phosphatase activity | transmembrane receptor protein tyrosine phosphatase signaling pathway | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRE[protein tyrosine phosphatase, receptor type, E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGAAAA (19) 1.6 0.0016 Cb medulloblastoma TGAACTGCAA (3) 4.6 0.0046 Cb medulloblastoma AAAAAGAAAA (19) 2.3 0.0023 Cb medulloblastoma GTGCAGACCC (5) 2.3 0.0023 Cb medulloblastoma TTAATTTATT (4) 2.3 0.0023 P8 GC+1d culture CTATTAGGAA (3) 2.3 0.0023 P8 GC+1d culture AAAAAGAAAA (19) 1.1 0.0011 P8 GC+1d culture TGAACTGCAA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAGAAAA (19) 2.3 0.0023 P8 GC+SHH+1d culture CTATTAGGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAAATGGAA (9) 1.2 0.0012 3T3 fibroblasts GTGCAGACCC (5) 3.5 0.0035 E15 cortex GAAAATGGAA (9) 4.9 0.0049 E15 cortex TGAACTGCAA (3) 4.9 0.0049 Hypothalamus CTATTAGGAA (3) 1.8 0.0018 Hypothalamus TGAACTGCAA (3) 1.8 0.0018 Hypothalamus TTAATTTATT (4) 1.8 0.0018 E12.5 retina CTATTAGGAA (3) 7.5 0.0075 E14.5 retina TTAATTTATT (4) 7.3 0.0073 E16.5 retina TTAATTTATT (4) 3.6 0.0036 E16.5 retina AAAAAGAAAA (19) 1.8 0.0018 E18.5 retina CTATTAGGAA (3) 1.8 0.0018 E18.5 retina TTAATTTATT (4) 1.8 0.0018 P0.5 retina AAAAAGAAAA (19) 3.9 0.0039 P0.5 retina GTGCAGACCC (5) 3.9 0.0039 P2.5 retina AAAAAGAAAA (19) 3.5 0.0035 P2.5 retina TGAACTGCAA (3) 1.8 0.0018 P4.5 retina AAAAAGAAAA (19) 4 0.004 P4.5 retina TGAACTGCAA (3) 2 0.002 P6.5 retina CTATTAGGAA (3) 1.7 0.0017 P6.5 retina GAAAATGGAA (9) 1.7 0.0017 P10.5 crx- retina CTATTAGGAA (3) 5.6 0.0056 P10.5 crx- retina TGAACTGCAA (3) 3.7 0.0037 P10.5 crx- retina TTAATTTATT (4) 1.9 0.0019 P10.5 crx+ retina CTATTAGGAA (3) 1.9 0.0019 Adult retinal CTATTAGGAA (3) 3.7 0.0037 Adult retinal TTAATTTATT (4) 1.9 0.0019 ONL AAAAAGAAAA (19) 3.8 0.0038