Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.121878
Tpm1
tropomyosin 1, alpha
9
9 40.0 cM
22003
Mm.121878
AI854628
expressed sequence AI854628
9
102625
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAACAGAAC
(
2
)
1.6
0.0016
P8 Cb GC
AGATGTGTTG
(
2
)
1.6
0.0016
P8 Cb GC
GTGAAACCCT
(
2
)
1.6
0.0016
P8 Cb GC
TCAGCTGGGG
(
2
)
1.6
0.0016
Cb medulloblastoma
TCAGGGTAGA
(
2
)
6.9
0.0069
Cb medulloblastoma
AGAACAGAAC
(
2
)
2.3
0.0023
Cb medulloblastoma
AGATGTGTTG
(
2
)
2.3
0.0023
Cb medulloblastoma
CTTACCGTGA
(
2
)
2.3
0.0023
Cb medulloblastoma
GTGAAACCCT
(
2
)
2.3
0.0023
P8 GC+1d culture
CCCGTAGCCC
(
2
)
13.7
0.0137
P8 GC+1d culture
AAAGTCATTG
(
2
)
2.3
0.0023
P8 GC+1d culture
GTGAAACCCT
(
2
)
1.1
0.0011
P8 GC+1d culture
TCCAGAAAAT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCGTAGCCC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTACCGTGA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGAAACCCT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TCAGCTGGGG
(
2
)
1.2
0.0012
3T3 fibroblasts
CCCGTAGCCC
(
2
)
178.8
0.1788
3T3 fibroblasts
TCAGCTGGGG
(
2
)
3.5
0.0035
E15 cortex
AAAGTCATTG
(
2
)
4.9
0.0049
P1 cortex
TCCAGAAAAT
(
2
)
13.6
0.0136
P1 cortex
CCCGTAGCCC
(
2
)
9.1
0.0091
P1 cortex
AGATGTGTTG
(
2
)
4.5
0.0045
Hypothalamus
AGAACAGAAC
(
2
)
1.8
0.0018
Hypothalamus
AGATGTGTTG
(
2
)
1.8
0.0018
Hypothalamus
GACGCCATCA
(
3
)
1.8
0.0018
E12.5 retina
CCCGTAGCCC
(
2
)
1.9
0.0019
E14.5 retina
GTGAAACCCT
(
2
)
1.8
0.0018
E16.5 retina
CCCGTAGCCC
(
2
)
5.4
0.0054
E16.5 retina
CTACAGACCA
(
2
)
1.8
0.0018
P0.5 retina
CCCGTAGCCC
(
2
)
5.9
0.0059
P2.5 retina
CCCGTAGCCC
(
2
)
3.5
0.0035
P2.5 retina
AGATGTGTTG
(
2
)
1.8
0.0018
P4.5 retina
CCCGTAGCCC
(
2
)
5.9
0.0059
P4.5 retina
CTACAGACCA
(
2
)
2
0.002
P6.5 retina
AGATGTGTTG
(
2
)
1.7
0.0017
P6.5 retina
CCCGTAGCCC
(
2
)
1.7
0.0017
P6.5 retina
CTTACCGTGA
(
2
)
1.7
0.0017
P10.5 crx- retina
AGATGTGTTG
(
2
)
1.9
0.0019
P10.5 crx- retina
TCAGGGTAGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCAGGGTAGA
(
2
)
13.5
0.0135
P10.5 crx+ retina
AGAACAGAAC
(
2
)
1.9
0.0019
Adult retinal
AAAGTCATTG
(
2
)
1.9
0.0019
ONL
GTGAAACCCT
(
2
)
1.9
0.0019
ONL
TCCAGAAAAT
(
2
)
1.9
0.0019
