Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.124176
Limk2
LIM motif-containing protein kinase 2
11
11 D
16886
Mm.124176
AL022704
expressed sequence AL022704
11
103900
Mm.124176
A930024P04Rik
RIKEN cDNA A930024P04 gene
11
320087
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 33 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCAGACTA
(
3
)
9.8
0.0098
P8 Cb GC
ATGATAATAA
(
4
)
1.6
0.0016
P8 Cb GC
GAATAAATAA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGATGGGTTG
(
3
)
4.6
0.0046
P8 GC+1d culture
AAGCAGACTA
(
3
)
4.6
0.0046
P8 GC+1d culture
TGATGGGTTG
(
3
)
2.3
0.0023
P8 GC+1d culture
ATGATAATAA
(
4
)
1.1
0.0011
P8 GC+1d culture
GCGGCGCTGG
(
4
)
1.1
0.0011
P8 GC+1d culture
GGGACCCCTG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GAATAAATAA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGTATGGCC
(
3
)
1.2
0.0012
E15 cortex
TGATGGGTTG
(
3
)
4.9
0.0049
P1 cortex
AAGCAGACTA
(
3
)
4.5
0.0045
Hypothalamus
GGGACCCCTG
(
4
)
5.4
0.0054
Hypothalamus
TGATGGGTTG
(
3
)
5.4
0.0054
Hypothalamus
AAGCAGACTA
(
3
)
1.8
0.0018
Hypothalamus
ATGATAATAA
(
4
)
1.8
0.0018
E12.5 retina
AAGCAGACTA
(
3
)
3.8
0.0038
E12.5 retina
GAATAAATAA
(
3
)
1.9
0.0019
E12.5 retina
GAGTATGGCC
(
3
)
1.9
0.0019
E14.5 retina
AAGCAGACTA
(
3
)
5.5
0.0055
E14.5 retina
ATGATAATAA
(
4
)
1.8
0.0018
E14.5 retina
GAATAAATAA
(
3
)
1.8
0.0018
E14.5 retina
GCGGCGCTGG
(
4
)
1.8
0.0018
E16.5 retina
TGATGGGTTG
(
3
)
1.8
0.0018
E18.5 retina
AAGCAGACTA
(
3
)
9.1
0.0091
E18.5 retina
TGATGGGTTG
(
3
)
3.6
0.0036
E18.5 retina
ATGATAATAA
(
4
)
1.8
0.0018
E18.5 retina
GAATAAATAA
(
3
)
1.8
0.0018
E18.5 retina
GAGTATGGCC
(
3
)
1.8
0.0018
P0.5 retina
AAGCAGACTA
(
3
)
2
0.002
P0.5 retina
GCTCCTGCTT
(
3
)
2
0.002
P0.5 retina
TGATGGGTTG
(
3
)
2
0.002
P2.5 retina
AAGCAGACTA
(
3
)
1.8
0.0018
P2.5 retina
GAATAAATAA
(
3
)
1.8
0.0018
P2.5 retina
TGATGGGTTG
(
3
)
1.8
0.0018
P4.5 retina
AAGCAGACTA
(
3
)
11.9
0.0119
P4.5 retina
GCTCCTGCTT
(
3
)
2
0.002
P4.5 retina
GGGACCCCTG
(
4
)
2
0.002
P6.5 retina
AAGCAGACTA
(
3
)
10
0.01
P6.5 retina
TGATGGGTTG
(
3
)
5
0.005
P6.5 retina
ATGATAATAA
(
4
)
1.7
0.0017
P6.5 retina
GCGGCGCTGG
(
4
)
1.7
0.0017
P10.5 crx- retina
AAGCAGACTA
(
3
)
5.6
0.0056
P10.5 crx- retina
ATGATAATAA
(
4
)
3.7
0.0037
P10.5 crx- retina
GGGACCCCTG
(
4
)
1.9
0.0019
P10.5 crx- retina
TGATGGGTTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
AAGCAGACTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
ATGATAATAA
(
4
)
1.9
0.0019
Adult retinal
AAGCAGACTA
(
3
)
5.6
0.0056
Adult retinal
TGATGGGTTG
(
3
)
3.7
0.0037
Adult retinal
GAGTATGGCC
(
3
)
1.9
0.0019
ONL
AAGCAGACTA
(
3
)
3.8
0.0038
ONL
ATGATAATAA
(
4
)
3.8
0.0038
ONL
GAATAAATAA
(
3
)
1.9
0.0019
ONL
TGATGGGTTG
(
3
)
1.9
0.0019
