Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1287	Mapt	microtubule-associated protein tau	11	11 64.0 cM	17762
Gene Ontology	cytoskeletal regulatory protein binding | cytoskeleton | microtubule associated complex | microtubule stabilization | microtubule-based process | protein binding
Human Homolog	MAPT[microtubule-associated protein tau]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAGAAGAG 8.2 0.0082 P8 Cb GC ATTTCTTTGG 4.9 0.0049 P8 Cb GC CTGCCTGCCC (2) 3.3 0.0033 P8 Cb GC TGACTCAAGC 1.6 0.0016 Cb medulloblastoma CTGCCTGCCC (2) 13.9 0.0139 Cb medulloblastoma GAGAGAAGAG 9.2 0.0092 Cb medulloblastoma GTGGACTCAC (2) 2.3 0.0023 Cb medulloblastoma TGACTCAAGC 2.3 0.0023 P8 GC+1d culture GAGAGAAGAG 18.3 0.0183 P8 GC+1d culture CTGCCTGCCC (2) 10.3 0.0103 P8 GC+1d culture ATTTCTTTGG 5.7 0.0057 P8 GC+1d culture CACGTAATCA 1.1 0.0011 P8 GC+1d culture CCTCTCCCAG 1.1 0.0011 P8 GC+1d culture GCTTAAAAGA (2) 1.1 0.0011 P8 GC+1d culture TGACTCAAGC 1.1 0.0011 P8 GC+1d culture TTTTGAAGGG 1.1 0.0011 P8 GC+SHH+1d culture CTGCCTGCCC (2) 11.7 0.0117 P8 GC+SHH+1d culture GAGAGAAGAG 9.4 0.0094 P8 GC+SHH+1d culture ATTTCTTTGG 4.7 0.0047 P8 GC+SHH+1d culture ATTTGGAGTG 1.2 0.0012 P8 GC+SHH+1d culture TGACTCAAGC 1.2 0.0012 3T3 fibroblasts CTGCCTGCCC (2) 3.5 0.0035 E15 cortex CTGCCTGCCC (2) 59.4 0.0594 E15 cortex ATTTCTTTGG 14.8 0.0148 E15 cortex GAGAGAAGAG 14.8 0.0148 E15 cortex GCCAAAAAAT (3) 4.9 0.0049 E15 cortex TTTTGAAGGG 4.9 0.0049 P1 cortex GAGAGAAGAG 86.4 0.0864 P1 cortex CTGCCTGCCC (2) 81.8 0.0818 P1 cortex ATTTCTTTGG 54.5 0.0545 P1 cortex TGACTCAAGC 9.1 0.0091 P1 cortex GTGGACTCAC (2) 4.5 0.0045 Hypothalamus GAGAGAAGAG 25.4 0.0254 Hypothalamus CTGCCTGCCC (2) 12.7 0.0127 Hypothalamus ACGACCCAGT 3.6 0.0036 Hypothalamus ATTTCTTTGG 1.8 0.0018 Hypothalamus ATTTGGAGTG 1.8 0.0018 Hypothalamus CACGTAATCA 1.8 0.0018 Hypothalamus GCCAAAAAAT (3) 1.8 0.0018 Hypothalamus GGGACTTAAT 1.8 0.0018 Hypothalamus TTTTGAAGGG 1.8 0.0018 E12.5 retina GAGAGAAGAG 13.1 0.0131 E12.5 retina CCCAGTACAG 1.9 0.0019 E14.5 retina GAGAGAAGAG 21.9 0.0219 E14.5 retina CTGCCTGCCC (2) 14.6 0.0146 E14.5 retina ACGACCCAGT 1.8 0.0018 E14.5 retina CACGTAATCA 1.8 0.0018 E14.5 retina CCTCTCCCAG 1.8 0.0018 E14.5 retina GGGACTTAAT 1.8 0.0018 E16.5 retina GAGAGAAGAG 25.4 0.0254 E16.5 retina CTGCCTGCCC (2) 23.5 0.0235 E16.5 retina ATTTCTTTGG 1.8 0.0018 E16.5 retina ATTTGGAGTG 1.8 0.0018 E16.5 retina CACGTAATCA 1.8 0.0018 E18.5 retina GAGAGAAGAG 18.2 0.0182 E18.5 retina CTGCCTGCCC (2) 9.1 0.0091 E18.5 retina ATTTCTTTGG 3.6 0.0036 E18.5 retina GGGACTTAAT 1.8 0.0018 E18.5 retina GTGGACTCAC (2) 1.8 0.0018 P0.5 retina CTGCCTGCCC (2) 19.6 0.0196 P0.5 retina GAGAGAAGAG 9.8 0.0098 P0.5 retina ATTTCTTTGG 3.9 0.0039 P0.5 retina GCCAAAAAAT (3) 2 0.002 P2.5 retina GAGAGAAGAG 24.6 0.0246 P2.5 retina CTGCCTGCCC (2) 21.1 0.0211 P2.5 retina ATTTCTTTGG 3.5 0.0035 P2.5 retina GCTTAAAAGA (2) 1.8 0.0018 P2.5 retina GTGGACTCAC (2) 1.8 0.0018 P4.5 retina GAGAGAAGAG 15.9 0.0159 P4.5 retina CTGCCTGCCC (2) 9.9 0.0099 P4.5 retina GCTTAAAAGA (2) 2 0.002 P4.5 retina GTGGACTCAC (2) 2 0.002 P6.5 retina GAGAGAAGAG 13.3 0.0133 P6.5 retina ATTTCTTTGG 5 0.005 P6.5 retina CTGCCTGCCC (2) 5 0.005 P6.5 retina GCTTAAAAGA (2) 3.3 0.0033 P6.5 retina CACGTAATCA 1.7 0.0017 P6.5 retina CCCAGTACAG 1.7 0.0017 P10.5 crx- retina CTGCCTGCCC (2) 29.7 0.0297 P10.5 crx- retina ATTTCTTTGG 9.3 0.0093 P10.5 crx- retina GCTTAAAAGA (2) 9.3 0.0093 P10.5 crx- retina GAGAGAAGAG 7.4 0.0074 P10.5 crx- retina CCTCTCCCAG 1.9 0.0019 P10.5 crx+ retina CTGCCTGCCC (2) 17.3 0.0173 P10.5 crx+ retina GAGAGAAGAG 1.9 0.0019 P10.5 crx+ retina GTGGACTCAC (2) 1.9 0.0019 Adult retinal GAGAGAAGAG 9.3 0.0093 Adult retinal CTGCCTGCCC (2) 3.7 0.0037 Adult retinal CCCAGTACAG 1.9 0.0019 Adult retinal GCTTAAAAGA (2) 1.9 0.0019 Adult retinal GTGGACTCAC (2) 1.9 0.0019 ONL GCTTAAAAGA (2) 3.8 0.0038 ONL ATTTCTTTGG 1.9 0.0019 ONL GTGGACTCAC (2) 1.9 0.0019