Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1287	Mapt	microtubule-associated protein tau	11	11 64.0 cM	17762
Gene Ontology	cytoskeletal regulatory protein binding | cytoskeleton | microtubule associated complex | microtubule stabilization | microtubule-based process | protein binding
Human Homolog	MAPT[microtubule-associated protein tau]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAGAAGAG (2) 8.2 0.0082 P8 Cb GC ATTTCCTTTG (4) 6.5 0.0065 P8 Cb GC ATTTCTTTGG (2) 4.9 0.0049 P8 Cb GC CTGCCTGCCC (5) 3.3 0.0033 P8 Cb GC AAAAAGGGTT (5) 1.6 0.0016 P8 Cb GC ATGGACTTTA (13) 1.6 0.0016 P8 Cb GC GAGCAGAAAT (5) 1.6 0.0016 P8 Cb GC TGACTCAAGC 1.6 0.0016 P8 Cb GC TTTTTTTTTC (16) 1.6 0.0016 Cb medulloblastoma CTGCCTGCCC (5) 13.9 0.0139 Cb medulloblastoma GAGAGAAGAG (2) 9.2 0.0092 Cb medulloblastoma ATTTCCTTTG (4) 2.3 0.0023 Cb medulloblastoma GTGGACTCAC (2) 2.3 0.0023 Cb medulloblastoma TGACTCAAGC 2.3 0.0023 Cb medulloblastoma TTTTTTTTTC (16) 2.3 0.0023 P8 GC+1d culture GAGAGAAGAG (2) 18.3 0.0183 P8 GC+1d culture CTGCCTGCCC (5) 10.3 0.0103 P8 GC+1d culture ATTTCTTTGG (2) 5.7 0.0057 P8 GC+1d culture ATGGACTTTA (13) 2.3 0.0023 P8 GC+1d culture GCCAAAATTT (6) 2.3 0.0023 P8 GC+1d culture TGTTGGAGGG (4) 2.3 0.0023 P8 GC+1d culture AAAAAGGGTT (5) 1.1 0.0011 P8 GC+1d culture CACGTAATCA (2) 1.1 0.0011 P8 GC+1d culture CCTCTCCCAG (4) 1.1 0.0011 P8 GC+1d culture GAGCAGAAAT (5) 1.1 0.0011 P8 GC+1d culture GCTTAAAAGA (5) 1.1 0.0011 P8 GC+1d culture TGACTCAAGC 1.1 0.0011 P8 GC+1d culture TTTTGAAGGG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGCCTGCCC (5) 11.7 0.0117 P8 GC+SHH+1d culture GAGAGAAGAG (2) 9.4 0.0094 P8 GC+SHH+1d culture ATTTCTTTGG (2) 4.7 0.0047 P8 GC+SHH+1d culture TGTTGGAGGG (4) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAGGGTT (5) 2.3 0.0023 P8 GC+SHH+1d culture ATTTCCTTTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAGCAGAAAT (5) 2.3 0.0023 P8 GC+SHH+1d culture GCCAAAATTT (6) 2.3 0.0023 P8 GC+SHH+1d culture TTTTTTTTTC (16) 2.3 0.0023 P8 GC+SHH+1d culture ATGGACTTTA (13) 1.2 0.0012 P8 GC+SHH+1d culture ATTCGAGGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture ATTTGGAGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGACTCAAGC 1.2 0.0012 3T3 fibroblasts ATCTCCAGTG (3) 7 0.007 3T3 fibroblasts CTGCCTGCCC (5) 3.5 0.0035 E15 cortex CTGCCTGCCC (5) 59.4 0.0594 E15 cortex ATTTCTTTGG (2) 14.8 0.0148 E15 cortex GAGAGAAGAG (2) 14.8 0.0148 E15 cortex ATTTCCTTTG (4) 4.9 0.0049 E15 cortex GCCAAAAAAT (3) 4.9 0.0049 E15 cortex TTTTGAAGGG (2) 4.9 0.0049 P1 cortex GAGAGAAGAG (2) 86.4 0.0864 P1 cortex CTGCCTGCCC (5) 81.8 0.0818 P1 cortex ATTTCTTTGG (2) 54.5 0.0545 P1 cortex AAAAAGGGTT (5) 9.1 0.0091 P1 cortex TGACTCAAGC 9.1 0.0091 P1 cortex ATTTCCTTTG (4) 4.5 0.0045 P1 cortex GTGGACTCAC (2) 4.5 0.0045 P1 cortex TTTTTTTTTC (16) 4.5 0.0045 Hypothalamus GAGAGAAGAG (2) 25.4 0.0254 Hypothalamus CTGCCTGCCC (5) 12.7 0.0127 Hypothalamus ACGACCCAGT 3.6 0.0036 Hypothalamus TTTTTTTTTC (16) 3.6 0.0036 Hypothalamus AAAAAGGGTT (5) 1.8 0.0018 Hypothalamus ATTTCCTTTG (4) 1.8 0.0018 Hypothalamus ATTTCTTTGG (2) 1.8 0.0018 Hypothalamus ATTTGGAGTG (2) 1.8 0.0018 Hypothalamus CACGTAATCA (2) 1.8 0.0018 Hypothalamus GCCAAAAAAT (3) 1.8 0.0018 Hypothalamus GGGACTTAAT (3) 1.8 0.0018 Hypothalamus TGTTGGAGGG (4) 1.8 0.0018 Hypothalamus TTTTGAAGGG (2) 1.8 0.0018 E12.5 retina GAGAGAAGAG (2) 13.1 0.0131 E12.5 retina ATTTCCTTTG (4) 5.6 0.0056 E12.5 retina AAAAAGGGTT (5) 3.8 0.0038 E12.5 retina CCCAGTACAG 1.9 0.0019 E12.5 retina TTTTTTTTTC (16) 1.9 0.0019 E14.5 retina GAGAGAAGAG (2) 21.9 0.0219 E14.5 retina CTGCCTGCCC (5) 14.6 0.0146 E14.5 retina ATTTCCTTTG (4) 5.5 0.0055 E14.5 retina GAGCAGAAAT (5) 3.6 0.0036 E14.5 retina TGTTGGAGGG (4) 3.6 0.0036 E14.5 retina TTTTTTTTTC (16) 3.6 0.0036 E14.5 retina AAAAAGGGTT (5) 1.8 0.0018 E14.5 retina ACGACCCAGT 1.8 0.0018 E14.5 retina CACGTAATCA (2) 1.8 0.0018 E14.5 retina CCTCTCCCAG (4) 1.8 0.0018 E14.5 retina GAAACCAGGC (5) 1.8 0.0018 E14.5 retina GGGACTTAAT (3) 1.8 0.0018 E16.5 retina GAGAGAAGAG (2) 25.4 0.0254 E16.5 retina CTGCCTGCCC (5) 23.5 0.0235 E16.5 retina ATTTCCTTTG (4) 1.8 0.0018 E16.5 retina ATTTCTTTGG (2) 1.8 0.0018 E16.5 retina ATTTGGAGTG (2) 1.8 0.0018 E16.5 retina CACGTAATCA (2) 1.8 0.0018 E16.5 retina GAAACCAGGC (5) 1.8 0.0018 E18.5 retina GAGAGAAGAG (2) 18.2 0.0182 E18.5 retina CTGCCTGCCC (5) 9.1 0.0091 E18.5 retina TTTTTTTTTC (16) 5.5 0.0055 E18.5 retina ATTTCTTTGG (2) 3.6 0.0036 E18.5 retina ATTTCCTTTG (4) 1.8 0.0018 E18.5 retina GGGACTTAAT (3) 1.8 0.0018 E18.5 retina GTGGACTCAC (2) 1.8 0.0018 P0.5 retina CTGCCTGCCC (5) 19.6 0.0196 P0.5 retina GAGAGAAGAG (2) 9.8 0.0098 P0.5 retina ATTTCTTTGG (2) 3.9 0.0039 P0.5 retina GCCAAAATTT (6) 3.9 0.0039 P0.5 retina AAAAAGGGTT (5) 2 0.002 P0.5 retina ATTTCCTTTG (4) 2 0.002 P0.5 retina GAGCAGAAAT (5) 2 0.002 P0.5 retina GCCAAAAAAT (3) 2 0.002 P2.5 retina GAGAGAAGAG (2) 24.6 0.0246 P2.5 retina CTGCCTGCCC (5) 21.1 0.0211 P2.5 retina AAAAAGGGTT (5) 3.5 0.0035 P2.5 retina ATTTCTTTGG (2) 3.5 0.0035 P2.5 retina TGTTGGAGGG (4) 3.5 0.0035 P2.5 retina ATGGACTTTA (13) 1.8 0.0018 P2.5 retina GCTTAAAAGA (5) 1.8 0.0018 P2.5 retina GTGGACTCAC (2) 1.8 0.0018 P2.5 retina TTTTTTTTTC (16) 1.8 0.0018 P4.5 retina GAGAGAAGAG (2) 15.9 0.0159 P4.5 retina CTGCCTGCCC (5) 9.9 0.0099 P4.5 retina ATTTCCTTTG (4) 4 0.004 P4.5 retina AAAAAGGGTT (5) 2 0.002 P4.5 retina GAAACCAGGC (5) 2 0.002 P4.5 retina GCCAAAATTT (6) 2 0.002 P4.5 retina GCTTAAAAGA (5) 2 0.002 P4.5 retina GTGGACTCAC (2) 2 0.002 P4.5 retina TTTTTTTTTC (16) 2 0.002 P6.5 retina GAGAGAAGAG (2) 13.3 0.0133 P6.5 retina GCCAAAATTT (6) 6.7 0.0067 P6.5 retina ATTTCTTTGG (2) 5 0.005 P6.5 retina CTGCCTGCCC (5) 5 0.005 P6.5 retina GCTTAAAAGA (5) 3.3 0.0033 P6.5 retina ATGGACTTTA (13) 1.7 0.0017 P6.5 retina CACGTAATCA (2) 1.7 0.0017 P6.5 retina CCCAGTACAG 1.7 0.0017 P6.5 retina TGTTGGAGGG (4) 1.7 0.0017 P10.5 crx- retina CTGCCTGCCC (5) 29.7 0.0297 P10.5 crx- retina ATTTCTTTGG (2) 9.3 0.0093 P10.5 crx- retina GCTTAAAAGA (5) 9.3 0.0093 P10.5 crx- retina GAGAGAAGAG (2) 7.4 0.0074 P10.5 crx- retina ATTTCCTTTG (4) 3.7 0.0037 P10.5 crx- retina AAAAAGGGTT (5) 1.9 0.0019 P10.5 crx- retina CCTCTCCCAG (4) 1.9 0.0019 P10.5 crx- retina TGTTGGAGGG (4) 1.9 0.0019 P10.5 crx+ retina CTGCCTGCCC (5) 17.3 0.0173 P10.5 crx+ retina TGTTGGAGGG (4) 3.8 0.0038 P10.5 crx+ retina AAAAAGGGTT (5) 1.9 0.0019 P10.5 crx+ retina ATCTCCAGTG (3) 1.9 0.0019 P10.5 crx+ retina GAAACCAGGC (5) 1.9 0.0019 P10.5 crx+ retina GAGAGAAGAG (2) 1.9 0.0019 P10.5 crx+ retina GTGGACTCAC (2) 1.9 0.0019 Adult retinal GAGAGAAGAG (2) 9.3 0.0093 Adult retinal TGTTGGAGGG (4) 5.6 0.0056 Adult retinal CTGCCTGCCC (5) 3.7 0.0037 Adult retinal ATTCGAGGGA (2) 1.9 0.0019 Adult retinal ATTTCCTTTG (4) 1.9 0.0019 Adult retinal CCCAGTACAG 1.9 0.0019 Adult retinal GCTTAAAAGA (5) 1.9 0.0019 Adult retinal GTGGACTCAC (2) 1.9 0.0019 ONL GCTTAAAAGA (5) 3.8 0.0038 ONL ATTCGAGGGA (2) 1.9 0.0019 ONL ATTTCTTTGG (2) 1.9 0.0019 ONL GTGGACTCAC (2) 1.9 0.0019