Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12926	Pparbp	peroxisome proliferator activated receptor binding protein	11		19014
Gene Ontology	brain development | chromatin binding | development | DNA binding | DNA replication | heart development | mediator complex | nucleus | organogenesis | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | thyroid hormone generation | transcription coactivator activity | transcription coactivator activity | transcription coactivator activity | transcription from Pol II promoter
Human Homolog	PPARBP[PPAR binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAATAAATT (2) 6.5 0.0065 Cb medulloblastoma CAAATAAATT (2) 4.6 0.0046 P8 GC+1d culture AAGTCAACGT 1.1 0.0011 P8 GC+SHH+1d culture CAAATAAATT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCACGGGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TAAAGAAAGT 1.2 0.0012 3T3 fibroblasts GGCACGGGAA (3) 17.5 0.0175 E15 cortex CAAATAAATT (2) 9.9 0.0099 E15 cortex GGCACGGGAA (3) 4.9 0.0049 Hypothalamus CAAATAAATT (2) 5.4 0.0054 Hypothalamus TAAAGAAAGT 1.8 0.0018 E12.5 retina AAGTCAACGT 1.9 0.0019 E14.5 retina AAGTCAACGT 1.8 0.0018 E16.5 retina CAAATAAATT (2) 3.6 0.0036 E18.5 retina CAAATAAATT (2) 5.5 0.0055 P0.5 retina CAAATAAATT (2) 2 0.002 P2.5 retina CAAATAAATT (2) 3.5 0.0035 P4.5 retina CAAATAAATT (2) 5.9 0.0059 P6.5 retina CAAATAAATT (2) 8.3 0.0083 P6.5 retina AAGTCAACGT 1.7 0.0017 P10.5 crx+ retina CAAATAAATT (2) 3.8 0.0038 P10.5 crx+ retina AAGTCAACGT 1.9 0.0019 P10.5 crx+ retina GGCACGGGAA (3) 1.9 0.0019 ONL CAAATAAATT (2) 3.8 0.0038 ONL GGCACGGGAA (3) 1.9 0.0019 ONL TAAAGAAAGT 1.9 0.0019