Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.142729	Tmsb4x	thymosin, beta 4, X chromosome	X	X 72.5 cM	19241
Gene Ontology	actin binding | cytoplasm | cytoskeleton | cytoskeleton organization and biogenesis
Human Homolog	TMSB4X[thymosin, beta 4, X-linked]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGTGAAGG 474.7 0.4747 P8 Cb GC CAAGTTCTTT (2) 34.3 0.0343 P8 Cb GC TCTGACAAAC 16.3 0.0163 P8 Cb GC CTGGTGAAGG 9.8 0.0098 P8 Cb GC TTGGCGAAGG 6.5 0.0065 P8 Cb GC GGCCAACAAG 1.6 0.0016 P8 Cb GC TAGGTGAAGG 1.6 0.0016 P8 Cb GC TCGGTGAAGG 1.6 0.0016 P8 Cb GC TGGTGAAGGA 1.6 0.0016 P8 Cb GC TTGGTGAAGA (2) 1.6 0.0016 Cb medulloblastoma TTGGTGAAGG 39.3 0.0393 Cb medulloblastoma CAAGTTCTTT (2) 2.3 0.0023 P8 GC+1d culture TTGGTGAAGG 607.3 0.6073 P8 GC+1d culture CAAGTTCTTT (2) 11.4 0.0114 P8 GC+1d culture CTGGTGAAGG 5.7 0.0057 P8 GC+1d culture TCTGACAAAC 4.6 0.0046 P8 GC+1d culture TTGGCGAAGG 4.6 0.0046 P8 GC+1d culture TGGTGAAGGA 3.4 0.0034 P8 GC+1d culture GTTGCTGGAA 1.1 0.0011 P8 GC+1d culture TCGGTGAAGG 1.1 0.0011 P8 GC+1d culture TTGGTGAAAG 1.1 0.0011 P8 GC+1d culture TTGGTGAAGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TTGGTGAAGG 336 0.336 P8 GC+SHH+1d culture CAAGTTCTTT (2) 18.7 0.0187 P8 GC+SHH+1d culture GTTGCTGGAA 5.9 0.0059 P8 GC+SHH+1d culture TCTGACAAAC 4.7 0.0047 P8 GC+SHH+1d culture TTGGCGAAGG 2.3 0.0023 P8 GC+SHH+1d culture CTGGTGAAGG 1.2 0.0012 P8 GC+SHH+1d culture GGCCAACAAG 1.2 0.0012 P8 GC+SHH+1d culture TCGGTGAAGG 1.2 0.0012 P8 GC+SHH+1d culture TTGGTGAAAG 1.2 0.0012 P8 GC+SHH+1d culture TTGGTGAAGA (2) 1.2 0.0012 3T3 fibroblasts TTGGTGAAGG 49.1 0.0491 3T3 fibroblasts TCGGTGAAGG 3.5 0.0035 E15 cortex TTGGTGAAGG 148.4 0.1484 E15 cortex TCTGACAAAC 54.4 0.0544 E15 cortex CAAGTTCTTT (2) 9.9 0.0099 E15 cortex TTGGTGAAGA (2) 4.9 0.0049 P1 cortex TTGGTGAAGG 222.7 0.2227 P1 cortex TCGGTGAAGG 4.5 0.0045 P1 cortex TTGGCGAAGG 4.5 0.0045 Hypothalamus TTGGTGAAGG 96 0.096 Hypothalamus CAAGTTCTTT (2) 9.1 0.0091 Hypothalamus TCTGACAAAC 7.2 0.0072 Hypothalamus GTTGCTGGAA 1.8 0.0018 E12.5 retina TTGGTGAAGG 142.7 0.1427 E12.5 retina CAAGTTCTTT (2) 7.5 0.0075 E12.5 retina GTTGCTGGAA 5.6 0.0056 E12.5 retina TCTGACAAAC 1.9 0.0019 E14.5 retina TTGGTGAAGG 34.6 0.0346 E14.5 retina TAGGTGAAGG 1.8 0.0018 E16.5 retina TTGGTGAAGG 32.6 0.0326 E16.5 retina TCTGACAAAC 5.4 0.0054 E16.5 retina CAAGTTCTTT (2) 3.6 0.0036 E18.5 retina TTGGTGAAGG 76.4 0.0764 E18.5 retina CAAGTTCTTT (2) 5.5 0.0055 E18.5 retina TTGGTGAAAG 1.8 0.0018 P0.5 retina TTGGTGAAGG 102.1 0.1021 P0.5 retina CAAGTTCTTT (2) 3.9 0.0039 P0.5 retina CTGGTGAAGG 3.9 0.0039 P0.5 retina GTTGCTGGAA 2 0.002 P0.5 retina TCTGACAAAC 2 0.002 P2.5 retina TTGGTGAAGG 80.9 0.0809 P2.5 retina CAAGTTCTTT (2) 3.5 0.0035 P2.5 retina TCTGACAAAC 3.5 0.0035 P2.5 retina GTTGCTGGAA 1.8 0.0018 P4.5 retina TTGGTGAAGG 87.2 0.0872 P4.5 retina CAAGTTCTTT (2) 7.9 0.0079 P4.5 retina TAGGTGAAGG 2 0.002 P6.5 retina TTGGTGAAGG 95 0.095 P6.5 retina CAAGTTCTTT (2) 5 0.005 P6.5 retina TCTGACAAAC 3.3 0.0033 P6.5 retina TGGTGAAGGA 1.7 0.0017 P10.5 crx- retina TTGGTGAAGG 65 0.065 P10.5 crx- retina GGCCAACAAG 1.9 0.0019 P10.5 crx+ retina TTGGTGAAGG 88.4 0.0884 P10.5 crx+ retina CAAGTTCTTT (2) 9.6 0.0096 P10.5 crx+ retina TCTGACAAAC 1.9 0.0019 Adult retinal TTGGTGAAGG 20.4 0.0204 Adult retinal CAAGTTCTTT (2) 1.9 0.0019 Adult retinal TTGGCGAAGG 1.9 0.0019 ONL TTGGTGAAGG 17.2 0.0172 ONL TCTGACAAAC 5.7 0.0057 ONL GGCCAACAAG 1.9 0.0019