Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.158700	AA986891	expressed sequence AA986891	13		105108
Mm.158700	Cspg2	chondroitin sulfate proteoglycan 2	13	13 55.0 cM	13003
Gene Ontology	calcium ion binding | cell adhesion | extracellular matrix | hyaluronic acid binding | sugar binding
Human Homolog	CSPG2[chondroitin sulfate proteoglycan 2 (versican)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGAATGCT (2) 3.3 0.0033 P8 Cb GC GATTTCTGGA (2) 1.6 0.0016 P8 Cb GC TATAGTGTAA (2) 1.6 0.0016 P8 GC+1d culture GAATTTTGAA (2) 1.1 0.0011 P8 GC+1d culture TATAGTGTAA (2) 1.1 0.0011 P8 GC+1d culture TATGAATGCT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAATTTTGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture TATAGTGTAA (2) 1.2 0.0012 3T3 fibroblasts TATGAATGCT (2) 7 0.007 E15 cortex TATAGTGTAA (2) 4.9 0.0049 P1 cortex TATAGTGTAA (2) 4.5 0.0045 P1 cortex TATGAATGCT (2) 4.5 0.0045 Hypothalamus GATTTCTGGA (2) 3.6 0.0036 Hypothalamus AACATACAAA (2) 1.8 0.0018 Hypothalamus GAATTTTGAA (2) 1.8 0.0018 E12.5 retina TATAGTGTAA (2) 1.9 0.0019 E14.5 retina TATGAATGCT (2) 1.8 0.0018 E16.5 retina GAATTTTGAA (2) 5.4 0.0054 E18.5 retina GAATTTTGAA (2) 1.8 0.0018 E18.5 retina TATAGTGTAA (2) 1.8 0.0018 E18.5 retina TATGAATGCT (2) 1.8 0.0018 P0.5 retina AACATACAAA (2) 2 0.002 P0.5 retina TATGAATGCT (2) 2 0.002 P4.5 retina AACATACAAA (2) 2 0.002 P4.5 retina TATGAATGCT (2) 2 0.002 P10.5 crx- retina GAATTTTGAA (2) 1.9 0.0019 P10.5 crx- retina TATAGTGTAA (2) 1.9 0.0019 P10.5 crx+ retina GAATTTTGAA (2) 3.8 0.0038 Adult retinal GAATTTTGAA (2) 1.9 0.0019 ONL AACATACAAA (2) 3.8 0.0038 ONL TATGAATGCT (2) 1.9 0.0019