Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181661	Setdb1	SET domain, bifurcated 1	3		84505
Mm.181661	C77070	expressed sequence C77070	3		97053
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGTGTCAG (3) 6.5 0.0065 P8 Cb GC GTTCCTAGGA (3) 3.3 0.0033 P8 Cb GC TTTTATTTAA (3) 3.3 0.0033 Cb medulloblastoma ACTGTGTCAG (3) 9.2 0.0092 Cb medulloblastoma GGATGCTGTC (4) 2.3 0.0023 Cb medulloblastoma TTTTATTTAA (3) 2.3 0.0023 P8 GC+1d culture GTTCCTAGGA (3) 4.6 0.0046 P8 GC+1d culture TTTTATTTAA (3) 3.4 0.0034 P8 GC+1d culture ACTGTGTCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GTTCCTAGGA (3) 3.5 0.0035 P8 GC+SHH+1d culture ACTGTGTCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GGATGCTGTC (4) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGTGTAT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTTATTTAA (3) 2.3 0.0023 E15 cortex GGATGCTGTC (4) 4.9 0.0049 P1 cortex TTTTATTTAA (3) 9.1 0.0091 Hypothalamus ACTGTGTCAG (3) 5.4 0.0054 Hypothalamus GGCTGTGTAT (3) 1.8 0.0018 Hypothalamus GTTCCTAGGA (3) 1.8 0.0018 Hypothalamus TTTTATTTAA (3) 1.8 0.0018 E12.5 retina TTTTATTTAA (3) 11.3 0.0113 E12.5 retina ACTGTGTCAG (3) 1.9 0.0019 E14.5 retina ACTGTGTCAG (3) 7.3 0.0073 E14.5 retina TTTTATTTAA (3) 3.6 0.0036 E14.5 retina GTTCCTAGGA (3) 1.8 0.0018 E16.5 retina ACTGTGTCAG (3) 3.6 0.0036 E18.5 retina ACTGTGTCAG (3) 5.5 0.0055 E18.5 retina TTTTATTTAA (3) 3.6 0.0036 P0.5 retina GGCTGTGTAT (3) 3.9 0.0039 P0.5 retina GTTCCTAGGA (3) 3.9 0.0039 P0.5 retina ACTGTGTCAG (3) 2 0.002 P0.5 retina TTTTATTTAA (3) 2 0.002 P2.5 retina ACTGTGTCAG (3) 1.8 0.0018 P2.5 retina TTTTATTTAA (3) 1.8 0.0018 P4.5 retina TTTTATTTAA (3) 13.9 0.0139 P4.5 retina ACTGTGTCAG (3) 2 0.002 P4.5 retina GGCTGTGTAT (3) 2 0.002 P6.5 retina TTTTATTTAA (3) 6.7 0.0067 P6.5 retina ACTGTGTCAG (3) 3.3 0.0033 P6.5 retina GTTCCTAGGA (3) 3.3 0.0033 P10.5 crx- retina GTTCCTAGGA (3) 1.9 0.0019 P10.5 crx- retina TTTTATTTAA (3) 1.9 0.0019 P10.5 crx+ retina ACTGTGTCAG (3) 9.6 0.0096 P10.5 crx+ retina TTTTATTTAA (3) 1.9 0.0019 Adult retinal GTTCCTAGGA (3) 3.7 0.0037 Adult retinal ACTGTGTCAG (3) 1.9 0.0019 ONL ACTGTGTCAG (3) 3.8 0.0038 ONL GTTCCTAGGA (3) 1.9 0.0019