Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212703	B230377B03Rik	RIKEN cDNA B230377B03 gene	11		320409
Mm.212703	Mdh1	malate dehydrogenase 1, NAD (soluble)	11	11 12.0 cM	17449
Gene Ontology	malate dehydrogenase activity | malic enzyme activity | oxidoreductase activity | tricarboxylic acid cycle
Human Homolog	MDH1[malate dehydrogenase 1, NAD (soluble)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTTAGTGC (2) 52.2 0.0522 P8 Cb GC CATCATCTTT (2) 1.6 0.0016 P8 Cb GC GGAAAGGAAG (3) 1.6 0.0016 Cb medulloblastoma TTGTTAGTGC (2) 108.7 0.1087 Cb medulloblastoma CATCATCTTT (2) 6.9 0.0069 Cb medulloblastoma GGAAAGGAAG (3) 4.6 0.0046 Cb medulloblastoma ATAGACTTTC (2) 2.3 0.0023 Cb medulloblastoma GAGAGGAAAG (3) 2.3 0.0023 P8 GC+1d culture TTGTTAGTGC (2) 43.4 0.0434 P8 GC+SHH+1d culture TTGTTAGTGC (2) 46.8 0.0468 3T3 fibroblasts TTGTTAGTGC (2) 7 0.007 E15 cortex TTGTTAGTGC (2) 14.8 0.0148 E15 cortex CCAAGGTGAA (6) 4.9 0.0049 P1 cortex TTGTTAGTGC (2) 22.7 0.0227 Hypothalamus TTGTTAGTGC (2) 244.5 0.2445 Hypothalamus ATAGACTTTC (2) 10.9 0.0109 E12.5 retina TTGTTAGTGC (2) 50.7 0.0507 E12.5 retina ATAGACTTTC (2) 1.9 0.0019 E14.5 retina TTGTTAGTGC (2) 52.8 0.0528 E14.5 retina CATCATCTTT (2) 1.8 0.0018 E14.5 retina GGAAAGGAAG (3) 1.8 0.0018 E16.5 retina TTGTTAGTGC (2) 70.6 0.0706 E18.5 retina TTGTTAGTGC (2) 69.1 0.0691 P0.5 retina TTGTTAGTGC (2) 37.3 0.0373 P0.5 retina GAGAGGAAAG (3) 3.9 0.0039 P2.5 retina TTGTTAGTGC (2) 42.2 0.0422 P2.5 retina CATCATCTTT (2) 3.5 0.0035 P2.5 retina GGAAAGGAAG (3) 1.8 0.0018 P4.5 retina TTGTTAGTGC (2) 83.2 0.0832 P4.5 retina ATAGACTTTC (2) 2 0.002 P4.5 retina CATCATCTTT (2) 2 0.002 P4.5 retina CCAAGGTGAA (6) 2 0.002 P4.5 retina GGAAAGGAAG (3) 2 0.002 P6.5 retina TTGTTAGTGC (2) 63.4 0.0634 P6.5 retina CATCATCTTT (2) 3.3 0.0033 P6.5 retina GGAAAGGAAG (3) 1.7 0.0017 P10.5 crx- retina TTGTTAGTGC (2) 76.2 0.0762 P10.5 crx- retina ATGGGTGTCC (2) 3.7 0.0037 P10.5 crx- retina CCAAGGTGAA (6) 1.9 0.0019 P10.5 crx+ retina TTGTTAGTGC (2) 82.7 0.0827 P10.5 crx+ retina ATGGGTGTCC (2) 1.9 0.0019 P10.5 crx+ retina CATCATCTTT (2) 1.9 0.0019 Adult retinal TTGTTAGTGC (2) 61.1 0.0611 Adult retinal CATCATCTTT (2) 3.7 0.0037 Adult retinal ATAGACTTTC (2) 1.9 0.0019 ONL TTGTTAGTGC (2) 57.5 0.0575 ONL ATAGACTTTC (2) 1.9 0.0019 ONL CATCATCTTT (2) 1.9 0.0019