Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2180	Hspcb	heat shock protein 1, beta	17	17 B3 (17 15.0 cM)	15516
Mm.2180	Slc35b1	solute carrier family 35, member B1	17	17 B3	73836
Gene Ontology	extracellular space | integral to membrane
Human Homolog	SLC35B2[solute carrier family 35, member B2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 154 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTACAAGAA (3) 63.6 0.0636 P8 Cb GC GTGAGCCCAT (2) 9.8 0.0098 P8 Cb GC ATGGCCAAAA (3) 8.2 0.0082 P8 Cb GC AAGGAGACCC (2) 3.3 0.0033 P8 Cb GC GAAGAGGTGG (3) 3.3 0.0033 P8 Cb GC GTCTGCCCGG (2) 3.3 0.0033 P8 Cb GC AACATCATCC (3) 1.6 0.0016 P8 Cb GC AAGGAGATCT (7) 1.6 0.0016 P8 Cb GC AAGGCCAGGC (5) 1.6 0.0016 P8 Cb GC CGCGAGGCAT (3) 1.6 0.0016 P8 Cb GC CGGTAGATGC (3) 1.6 0.0016 P8 Cb GC GACAGCTGTG (2) 1.6 0.0016 Cb medulloblastoma TCTACAAGAA (3) 18.5 0.0185 Cb medulloblastoma AACATCATCC (3) 2.3 0.0023 Cb medulloblastoma AAGGAGATCT (7) 2.3 0.0023 Cb medulloblastoma GAAGAGGTGG (3) 2.3 0.0023 Cb medulloblastoma GTGAGCCCAT (2) 2.3 0.0023 P8 GC+1d culture TCTACAAGAA (3) 119.9 0.1199 P8 GC+1d culture AACATCATCC (3) 4.6 0.0046 P8 GC+1d culture AAGGAGACCC (2) 3.4 0.0034 P8 GC+1d culture CGCGAGGCAT (3) 3.4 0.0034 P8 GC+1d culture AAGGCCAGGC (5) 2.3 0.0023 P8 GC+1d culture AAGGCCCAGG (3) 2.3 0.0023 P8 GC+1d culture CGGTAGATGC (3) 2.3 0.0023 P8 GC+1d culture TCCACAAGAA (2) 2.3 0.0023 P8 GC+1d culture ATGGCCAAAA (3) 1.1 0.0011 P8 GC+1d culture GAAGAGGTGG (3) 1.1 0.0011 P8 GC+1d culture GAGAGGAGGA (3) 1.1 0.0011 P8 GC+1d culture GTGAGCCCAT (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTACAAGAA (3) 125.3 0.1253 P8 GC+SHH+1d culture AACATCATCC (3) 7 0.007 P8 GC+SHH+1d culture CGCGAGGCAT (3) 3.5 0.0035 P8 GC+SHH+1d culture GAAGAGGTGG (3) 3.5 0.0035 P8 GC+SHH+1d culture CGGTAGATGC (3) 2.3 0.0023 P8 GC+SHH+1d culture GTGAGCCCAT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGGAGACCC (2) 1.2 0.0012 P8 GC+SHH+1d culture AAGGAGATCT (7) 1.2 0.0012 P8 GC+SHH+1d culture AAGGCCAGGC (5) 1.2 0.0012 P8 GC+SHH+1d culture AGCTTGCAGA (2) 1.2 0.0012 P8 GC+SHH+1d culture ATGAACACAC (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTACAAGAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCTGCCCGG (2) 1.2 0.0012 3T3 fibroblasts GTGAGCCCAT (2) 70.1 0.0701 3T3 fibroblasts CGCGAGGCAT (3) 3.5 0.0035 3T3 fibroblasts TCTACAAGAA (3) 3.5 0.0035 E15 cortex GTGAGCCCAT (2) 123.7 0.1237 E15 cortex TCTACAAGAA (3) 39.6 0.0396 E15 cortex AAGGAGACCC (2) 19.8 0.0198 E15 cortex ATCGGGCAGT (2) 9.9 0.0099 E15 cortex AAGATTCCAC (2) 4.9 0.0049 E15 cortex CGGTAGATGC (3) 4.9 0.0049 E15 cortex GACAGCTGTG (2) 4.9 0.0049 E15 cortex GAGAGGAGGA (3) 4.9 0.0049 P1 cortex TCTACAAGAA (3) 72.7 0.0727 P1 cortex GTGAGCCCAT (2) 27.3 0.0273 P1 cortex AACATCATCC (3) 13.6 0.0136 Hypothalamus TCTACAAGAA (3) 38 0.038 Hypothalamus GAAGAGGTGG (3) 16.3 0.0163 Hypothalamus AACATCATCC (3) 9.1 0.0091 Hypothalamus CGGTAGATGC (3) 3.6 0.0036 Hypothalamus ATCGGGCAGT (2) 1.8 0.0018 Hypothalamus ATGAACACAC (2) 1.8 0.0018 Hypothalamus GTGAGCCCAT (2) 1.8 0.0018 Hypothalamus TTTACAAAAA (2) 1.8 0.0018 E12.5 retina TCTACAAGAA (3) 125.8 0.1258 E12.5 retina AACATCATCC (3) 13.1 0.0131 E12.5 retina AGCTTGCAGA (2) 3.8 0.0038 E12.5 retina CGCGAGGCAT (3) 3.8 0.0038 E12.5 retina GAAGAGGTGG (3) 3.8 0.0038 E12.5 retina GTGAGCCCAT (2) 3.8 0.0038 E12.5 retina AAGGAGATCT (7) 1.9 0.0019 E12.5 retina CGGTAGATGC (3) 1.9 0.0019 E12.5 retina TTTACAAGAA (2) 1.9 0.0019 E14.5 retina TCTACAAGAA (3) 51 0.051 E14.5 retina CGCGAGGCAT (3) 7.3 0.0073 E14.5 retina TCCCTCATCA (2) 7.3 0.0073 E14.5 retina AAGATTCCAC (2) 5.5 0.0055 E14.5 retina AAGGAGATCT (7) 3.6 0.0036 E14.5 retina CGGTAGATGC (3) 3.6 0.0036 E14.5 retina GAAGAGGTGG (3) 3.6 0.0036 E14.5 retina AAGGAGACCC (2) 1.8 0.0018 E14.5 retina AAGGCCCAGG (3) 1.8 0.0018 E14.5 retina AGCTTGCAGA (2) 1.8 0.0018 E14.5 retina ATGAACACAC (2) 1.8 0.0018 E14.5 retina CCTACAAGAA (2) 1.8 0.0018 E14.5 retina GACAGCTGTG (2) 1.8 0.0018 E14.5 retina GAGAGGAGGA (3) 1.8 0.0018 E14.5 retina GTGAGCCCAT (2) 1.8 0.0018 E16.5 retina TCTACAAGAA (3) 63.4 0.0634 E16.5 retina CGGTAGATGC (3) 12.7 0.0127 E16.5 retina AGCTTGCAGA (2) 9.1 0.0091 E16.5 retina AACATCATCC (3) 5.4 0.0054 E16.5 retina GTGAGCCCAT (2) 5.4 0.0054 E16.5 retina AAGGAGATCT (7) 3.6 0.0036 E16.5 retina ATGAACACAC (2) 3.6 0.0036 E16.5 retina CGCGAGGCAT (3) 3.6 0.0036 E16.5 retina GACAGCTGTG (2) 3.6 0.0036 E16.5 retina TTTACAAAAA (2) 3.6 0.0036 E16.5 retina GAAGAGGTGG (3) 1.8 0.0018 E16.5 retina GTCTGCCCGG (2) 1.8 0.0018 E16.5 retina TCCACAAGAA (2) 1.8 0.0018 E16.5 retina TCCCTCATCA (2) 1.8 0.0018 E18.5 retina TCTACAAGAA (3) 32.7 0.0327 E18.5 retina AACATCATCC (3) 1.8 0.0018 E18.5 retina CGCGAGGCAT (3) 1.8 0.0018 E18.5 retina CGGTAGATGC (3) 1.8 0.0018 E18.5 retina GACCAGGAAA (2) 1.8 0.0018 E18.5 retina GTGAGCCCAT (2) 1.8 0.0018 P0.5 retina TCTACAAGAA (3) 51 0.051 P0.5 retina AACATCATCC (3) 5.9 0.0059 P0.5 retina GAAGAGGTGG (3) 3.9 0.0039 P0.5 retina AAGATTCCAC (2) 2 0.002 P0.5 retina AAGGCCAGGC (5) 2 0.002 P0.5 retina ATGAACACAC (2) 2 0.002 P0.5 retina CGGTAGATGC (3) 2 0.002 P0.5 retina GACCAGGAAA (2) 2 0.002 P0.5 retina GTCTGCCCGG (2) 2 0.002 P0.5 retina GTGAGCCCAT (2) 2 0.002 P2.5 retina TCTACAAGAA (3) 38.7 0.0387 P2.5 retina GTGAGCCCAT (2) 3.5 0.0035 P2.5 retina AACATCATCC (3) 1.8 0.0018 P2.5 retina GACAGCTGTG (2) 1.8 0.0018 P2.5 retina TTTACAAGAA (2) 1.8 0.0018 P4.5 retina TCTACAAGAA (3) 25.8 0.0258 P4.5 retina AGCTTGCAGA (2) 2 0.002 P4.5 retina CCTACAAGAA (2) 2 0.002 P4.5 retina GACCAGGAAA (2) 2 0.002 P4.5 retina GTGAGCCCAT (2) 2 0.002 P4.5 retina TTTACAAGAA (2) 2 0.002 P6.5 retina TCTACAAGAA (3) 38.3 0.0383 P6.5 retina AACATCATCC (3) 3.3 0.0033 P6.5 retina AAGGAGATCT (7) 1.7 0.0017 P6.5 retina GTGAGCCCAT (2) 1.7 0.0017 P6.5 retina TTTACAAAAA (2) 1.7 0.0017 P10.5 crx- retina TCTACAAGAA (3) 27.9 0.0279 P10.5 crx- retina AACATCATCC (3) 5.6 0.0056 P10.5 crx- retina CGGTAGATGC (3) 3.7 0.0037 P10.5 crx- retina AAGGCCCAGG (3) 1.9 0.0019 P10.5 crx- retina GAAGAGGTGG (3) 1.9 0.0019 P10.5 crx- retina TCCACAAGAA (2) 1.9 0.0019 P10.5 crx+ retina TCTACAAGAA (3) 25 0.025 P10.5 crx+ retina AACATCATCC (3) 3.8 0.0038 P10.5 crx+ retina GTGAGCCCAT (2) 3.8 0.0038 P10.5 crx+ retina AAGGCCAGGC (5) 1.9 0.0019 Adult retinal TCTACAAGAA (3) 9.3 0.0093 Adult retinal AACATCATCC (3) 5.6 0.0056 Adult retinal AAGGAGACCC (2) 1.9 0.0019 Adult retinal CCTACAAGAA (2) 1.9 0.0019 Adult retinal CGCGAGGCAT (3) 1.9 0.0019 Adult retinal GTCTGCCCGG (2) 1.9 0.0019 Adult retinal GTGAGCCCAT (2) 1.9 0.0019 ONL TCTACAAGAA (3) 7.7 0.0077 ONL AACATCATCC (3) 5.7 0.0057 ONL AAGGAGATCT (7) 1.9 0.0019