Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21938	Rps20	ribosomal protein S20	4		67427
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | RNA binding | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS20[ribosomal protein S20]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTACCAAGA 81.6 0.0816 P8 Cb GC GCATTTAAAG 3.3 0.0033 P8 Cb GC TAGGTGCTGG 3.3 0.0033 P8 Cb GC CGCACCGGTC 1.6 0.0016 Cb medulloblastoma CCTACCAAGA 23.1 0.0231 Cb medulloblastoma CGCACCGGTC 6.9 0.0069 Cb medulloblastoma GAATTTAAAG (2) 2.3 0.0023 P8 GC+1d culture CCTACCAAGA 65.1 0.0651 P8 GC+1d culture CGCACCGGTC 2.3 0.0023 P8 GC+1d culture TAGGTGCTGG 1.1 0.0011 P8 GC+SHH+1d culture CCTACCAAGA 59.7 0.0597 P8 GC+SHH+1d culture CGCACCGGTC 3.5 0.0035 P8 GC+SHH+1d culture GCTGAGGCGC 1.2 0.0012 3T3 fibroblasts CCTACCAAGA 224.3 0.2243 3T3 fibroblasts GCTGAGGCGC 3.5 0.0035 E15 cortex CCTACCAAGA 54.4 0.0544 P1 cortex CCTACCAAGA 50 0.05 P1 cortex GCTGAGGCGC 4.5 0.0045 Hypothalamus CCTACCAAGA 18.1 0.0181 Hypothalamus TAGGTGCTGG 5.4 0.0054 Hypothalamus GCTGAGGCGC 3.6 0.0036 Hypothalamus CGCACCGGTC 1.8 0.0018 Hypothalamus GCATTTAAAG 1.8 0.0018 E12.5 retina CCTACCAAGA 123.9 0.1239 E12.5 retina GCTGAGGCGC 7.5 0.0075 E12.5 retina CGCACCGGTC 3.8 0.0038 E12.5 retina TAGGTGCTGG 3.8 0.0038 E12.5 retina GCATTTAAAG 1.9 0.0019 E14.5 retina CCTACCAAGA 12.8 0.0128 E14.5 retina TAGGTGCTGG 9.1 0.0091 E14.5 retina CGCACCGGTC 7.3 0.0073 E16.5 retina CCTACCAAGA 29 0.029 E16.5 retina TAGGTGCTGG 7.2 0.0072 E16.5 retina CGCACCGGTC 3.6 0.0036 E18.5 retina CCTACCAAGA 12.7 0.0127 E18.5 retina CGCACCGGTC 5.5 0.0055 E18.5 retina TAGGTGCTGG 1.8 0.0018 P0.5 retina CCTACCAAGA 125.6 0.1256 P0.5 retina CGCACCGGTC 3.9 0.0039 P0.5 retina TAGGTGCTGG 3.9 0.0039 P0.5 retina GCTGAGGCGC 2 0.002 P2.5 retina CCTACCAAGA 29.9 0.0299 P2.5 retina TAGGTGCTGG 5.3 0.0053 P2.5 retina CGCACCGGTC 3.5 0.0035 P4.5 retina CCTACCAAGA 29.7 0.0297 P4.5 retina TAGGTGCTGG 2 0.002 P6.5 retina CCTACCAAGA 18.3 0.0183 P6.5 retina TAGGTGCTGG 5 0.005 P6.5 retina CGCACCGGTC 1.7 0.0017 P6.5 retina GCAGATGGCT 1.7 0.0017 P6.5 retina GCTGAGGCGC 1.7 0.0017 P10.5 crx- retina CCTACCAAGA 96.6 0.0966 P10.5 crx- retina CGCACCGGTC 1.9 0.0019 P10.5 crx+ retina CCTACCAAGA 26.9 0.0269 P10.5 crx+ retina TAGGTGCTGG 5.8 0.0058 P10.5 crx+ retina CGCACCGGTC 1.9 0.0019 Adult retinal CCTACCAAGA 27.8 0.0278 Adult retinal GAATTTAAAG (2) 1.9 0.0019 Adult retinal TAGGTGCTGG 1.9 0.0019 ONL CCTACCAAGA 30.6 0.0306 ONL GCAGATGGCT 3.8 0.0038 ONL GCATTTAAAG 3.8 0.0038 ONL TAGGTGCTGG 3.8 0.0038