Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.221452	AI317230	EST AI317230	14	14 60.0 cM	30912
Mm.221452	Kpnb3	karyopherin (importin) beta 3	14		70572
Gene Ontology	cytoplasm | GTPase inhibitor activity | intracellular protein transport | NLS-bearing substrate-nucleus import | nuclear localization sequence binding | nuclear pore | nucleus | protein binding | protein transport | protein transporter activity | protein-nucleus import, docking | RAN protein binding | transport
Human Homolog	RANBP5[RAN binding protein 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGGCAGTC (3) 11.4 0.0114 P8 Cb GC AAGACCCCTG (2) 1.6 0.0016 P8 Cb GC GCTGCCCTAC (2) 1.6 0.0016 P8 Cb GC TTTTAATAGA (2) 1.6 0.0016 Cb medulloblastoma TCTGGCAGTC (3) 4.6 0.0046 P8 GC+1d culture CAGTGACTCG (2) 3.4 0.0034 P8 GC+1d culture GCTGCCCTAC (2) 2.3 0.0023 P8 GC+1d culture AAGACCCCTG (2) 1.1 0.0011 P8 GC+1d culture GATCTCATCA (2) 1.1 0.0011 P8 GC+1d culture TTTTAATAGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTGGCAGTC (3) 12.9 0.0129 P8 GC+SHH+1d culture CAGTGACTCG (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCCCTAC (2) 2.3 0.0023 3T3 fibroblasts TCTGGCAGTC (3) 10.5 0.0105 E15 cortex TCTGGCAGTC (3) 19.8 0.0198 P1 cortex GCTGCCCTAC (2) 9.1 0.0091 P1 cortex TCTGGCAGTC (3) 9.1 0.0091 P1 cortex GCTGCCCCTA (3) 4.5 0.0045 P1 cortex TTTTAATAGA (2) 4.5 0.0045 Hypothalamus GCTGCCCTAC (2) 5.4 0.0054 E12.5 retina TCTGGCAGTC (3) 18.8 0.0188 E12.5 retina GCAGTCCACC (2) 5.6 0.0056 E12.5 retina GATCTCATCA (2) 1.9 0.0019 E12.5 retina GCTGCCCCTA (3) 1.9 0.0019 E14.5 retina TCTGGCAGTC (3) 10.9 0.0109 E14.5 retina AAGACCCCTG (2) 1.8 0.0018 E14.5 retina GCAGTCCACC (2) 1.8 0.0018 E16.5 retina TCTGGCAGTC (3) 5.4 0.0054 E16.5 retina GCTGCCCTAC (2) 1.8 0.0018 E18.5 retina TCTGGCAGTC (3) 10.9 0.0109 E18.5 retina GCTGCCCTAC (2) 7.3 0.0073 E18.5 retina AAACGGATGT (2) 3.6 0.0036 E18.5 retina TTTTAATAGA (2) 1.8 0.0018 P0.5 retina TCTGGCAGTC (3) 11.8 0.0118 P0.5 retina GCTGCCCTAC (2) 5.9 0.0059 P0.5 retina GCAGTCCACC (2) 3.9 0.0039 P0.5 retina TTTTAATAGA (2) 2 0.002 P2.5 retina TCTGGCAGTC (3) 10.6 0.0106 P2.5 retina AAACGGATGT (2) 1.8 0.0018 P2.5 retina AAGACCCCTG (2) 1.8 0.0018 P2.5 retina GCAGTCCACC (2) 1.8 0.0018 P2.5 retina TTTTAATAGA (2) 1.8 0.0018 P4.5 retina GCTGCCCTAC (2) 4 0.004 P4.5 retina TCTGGCAGTC (3) 2 0.002 P6.5 retina GCTGCCCTAC (2) 3.3 0.0033 P6.5 retina TCTGGCAGTC (3) 3.3 0.0033 P6.5 retina AAACGGATGT (2) 1.7 0.0017 P6.5 retina GCAGTCCACC (2) 1.7 0.0017 P10.5 crx- retina TCTGGCAGTC (3) 5.6 0.0056 P10.5 crx- retina GCTGCCCCTA (3) 1.9 0.0019 P10.5 crx+ retina TCTGGCAGTC (3) 17.3 0.0173 P10.5 crx+ retina AAACGGATGT (2) 1.9 0.0019 P10.5 crx+ retina GATCTCATCA (2) 1.9 0.0019 P10.5 crx+ retina GCAGTCCACC (2) 1.9 0.0019 Adult retinal AAGACCCCTG (2) 1.9 0.0019 Adult retinal GCTGCCCCTA (3) 1.9 0.0019 Adult retinal GCTGCCCTAC (2) 1.9 0.0019 Adult retinal TCTGGCAGTC (3) 1.9 0.0019 ONL TCTGGCAGTC (3) 3.8 0.0038