Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.234700
Ywhae
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
11
11 44.17 cM
22627
Mm.234700
BB217526
expressed sequence BB217526
11
104708
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 126 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAATTAACAT
(
2
)
57.1
0.0571
P8 Cb GC
CCTCCATCCT
(
3
)
24.5
0.0245
P8 Cb GC
CAGGGCGATG
(
5
)
6.5
0.0065
P8 Cb GC
CAGGGTGATG
(
4
)
6.5
0.0065
P8 Cb GC
CTGTGTTTCA
(
2
)
6.5
0.0065
P8 Cb GC
CTTTTCAGCA
(
5
)
4.9
0.0049
P8 Cb GC
TTTGACAGTA
(
2
)
3.3
0.0033
P8 Cb GC
CAAGCTGCCT
(
2
)
1.6
0.0016
P8 Cb GC
CAGGTGATGG
(
2
)
1.6
0.0016
Cb medulloblastoma
GAATTAACAT
(
2
)
64.7
0.0647
Cb medulloblastoma
CCTCCATCCT
(
3
)
9.2
0.0092
Cb medulloblastoma
CAGGGCGATG
(
5
)
6.9
0.0069
Cb medulloblastoma
CTGTGTTTCA
(
2
)
4.6
0.0046
Cb medulloblastoma
CTTTTCAGCA
(
5
)
4.6
0.0046
Cb medulloblastoma
CAGGGTGATG
(
4
)
2.3
0.0023
P8 GC+1d culture
GAATTAACAT
(
2
)
58.2
0.0582
P8 GC+1d culture
CAGGGCGATG
(
5
)
20.5
0.0205
P8 GC+1d culture
CTTTTCAGCA
(
5
)
19.4
0.0194
P8 GC+1d culture
CCTCCATCCT
(
3
)
13.7
0.0137
P8 GC+1d culture
CAGGGTGATG
(
4
)
11.4
0.0114
P8 GC+1d culture
CGTGTTCAAC
(
2
)
5.7
0.0057
P8 GC+1d culture
CAAGCTGCCT
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGTGTTTCA
(
2
)
2.3
0.0023
P8 GC+1d culture
TTTGACAGTA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GAATTAACAT
(
2
)
74.9
0.0749
P8 GC+SHH+1d culture
CCTCCATCCT
(
3
)
21.1
0.0211
P8 GC+SHH+1d culture
CTTTTCAGCA
(
5
)
14.1
0.0141
P8 GC+SHH+1d culture
CAGGGCGATG
(
5
)
10.5
0.0105
P8 GC+SHH+1d culture
CAGGGTGATG
(
4
)
9.4
0.0094
P8 GC+SHH+1d culture
CGTGTTCAAC
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TTTGACAGTA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGTGTTTCA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CAAGCTGCCT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGGCTTCCA
(
2
)
1.2
0.0012
3T3 fibroblasts
CAGGGCGATG
(
5
)
24.5
0.0245
3T3 fibroblasts
CTTTTCAGCA
(
5
)
14
0.014
3T3 fibroblasts
CCTCCATCCT
(
3
)
7
0.007
3T3 fibroblasts
CAGGTGATGG
(
2
)
3.5
0.0035
E15 cortex
CCTCCATCCT
(
3
)
24.7
0.0247
E15 cortex
GAATTAACAT
(
2
)
24.7
0.0247
E15 cortex
CTTTTCAGCA
(
5
)
14.8
0.0148
E15 cortex
CAAGCTGCCT
(
2
)
4.9
0.0049
P1 cortex
GAATTAACAT
(
2
)
40.9
0.0409
P1 cortex
CTTTTCAGCA
(
5
)
22.7
0.0227
P1 cortex
CCTCCATCCT
(
3
)
9.1
0.0091
P1 cortex
CAGGGTGATG
(
4
)
4.5
0.0045
Hypothalamus
GAATTAACAT
(
2
)
45.3
0.0453
Hypothalamus
CAGGGTGATG
(
4
)
16.3
0.0163
Hypothalamus
CTTTTCAGCA
(
5
)
10.9
0.0109
Hypothalamus
CTGTGTTTCA
(
2
)
7.2
0.0072
Hypothalamus
CCTCCATCCT
(
3
)
5.4
0.0054
Hypothalamus
CAAGCTGCCT
(
2
)
1.8
0.0018
Hypothalamus
CAGGCTTCCA
(
2
)
1.8
0.0018
Hypothalamus
CAGGTGATGG
(
2
)
1.8
0.0018
E12.5 retina
GAATTAACAT
(
2
)
82.6
0.0826
E12.5 retina
CCTCCATCCT
(
3
)
16.9
0.0169
E12.5 retina
CTTTTCAGCA
(
5
)
15
0.015
E12.5 retina
CAGGGTGATG
(
4
)
9.4
0.0094
E14.5 retina
GAATTAACAT
(
2
)
107.5
0.1075
E14.5 retina
CCTCCATCCT
(
3
)
12.8
0.0128
E14.5 retina
CTTTTCAGCA
(
5
)
9.1
0.0091
E14.5 retina
CAGGGTGATG
(
4
)
5.5
0.0055
E14.5 retina
CTGTGTTTCA
(
2
)
5.5
0.0055
E14.5 retina
CAGGCTTCCA
(
2
)
1.8
0.0018
E16.5 retina
GAATTAACAT
(
2
)
90.6
0.0906
E16.5 retina
CCTCCATCCT
(
3
)
10.9
0.0109
E16.5 retina
CTTTTCAGCA
(
5
)
7.2
0.0072
E16.5 retina
CTGTGTTTCA
(
2
)
5.4
0.0054
E16.5 retina
CAGGGTGATG
(
4
)
3.6
0.0036
E16.5 retina
CAAGCTGCCT
(
2
)
1.8
0.0018
E16.5 retina
CGTGTTCAAC
(
2
)
1.8
0.0018
E18.5 retina
GAATTAACAT
(
2
)
121.9
0.1219
E18.5 retina
CCTCCATCCT
(
3
)
12.7
0.0127
E18.5 retina
CTGTGTTTCA
(
2
)
9.1
0.0091
E18.5 retina
CAGGCTTCCA
(
2
)
5.5
0.0055
E18.5 retina
CTTTTCAGCA
(
5
)
5.5
0.0055
E18.5 retina
CAAGCTGCCT
(
2
)
1.8
0.0018
E18.5 retina
CAGGGTGATG
(
4
)
1.8
0.0018
E18.5 retina
CTGGCTTCCA
(
2
)
1.8
0.0018
P0.5 retina
GAATTAACAT
(
2
)
17.7
0.0177
P0.5 retina
CCTCCATCCT
(
3
)
13.7
0.0137
P0.5 retina
CAGGGTGATG
(
4
)
9.8
0.0098
P0.5 retina
CTTTTCAGCA
(
5
)
9.8
0.0098
P0.5 retina
CTGTGTTTCA
(
2
)
3.9
0.0039
P2.5 retina
GAATTAACAT
(
2
)
68.6
0.0686
P2.5 retina
CAGGGTGATG
(
4
)
21.1
0.0211
P2.5 retina
CCTCCATCCT
(
3
)
14.1
0.0141
P2.5 retina
CTTTTCAGCA
(
5
)
8.8
0.0088
P2.5 retina
CTGTGTTTCA
(
2
)
3.5
0.0035
P2.5 retina
CAAGCTGCCT
(
2
)
1.8
0.0018
P4.5 retina
GAATTAACAT
(
2
)
67.4
0.0674
P4.5 retina
CCTCCATCCT
(
3
)
7.9
0.0079
P4.5 retina
CTGTGTTTCA
(
2
)
5.9
0.0059
P4.5 retina
CTTTTCAGCA
(
5
)
5.9
0.0059
P4.5 retina
CAGGCTTCCA
(
2
)
4
0.004
P4.5 retina
CAGGGTGATG
(
4
)
4
0.004
P6.5 retina
GAATTAACAT
(
2
)
31.7
0.0317
P6.5 retina
CCTCCATCCT
(
3
)
8.3
0.0083
P6.5 retina
CTGTGTTTCA
(
2
)
8.3
0.0083
P6.5 retina
CAGGGTGATG
(
4
)
6.7
0.0067
P6.5 retina
CTTTTCAGCA
(
5
)
6.7
0.0067
P6.5 retina
AACAGAAGGA
(
2
)
3.3
0.0033
P10.5 crx- retina
GAATTAACAT
(
2
)
42.7
0.0427
P10.5 crx- retina
CCTCCATCCT
(
3
)
11.1
0.0111
P10.5 crx- retina
CAGGGCGATG
(
5
)
5.6
0.0056
P10.5 crx- retina
CTTTTCAGCA
(
5
)
5.6
0.0056
P10.5 crx- retina
AACAGAAGGA
(
2
)
1.9
0.0019
P10.5 crx- retina
CTGTGTTTCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAATTAACAT
(
2
)
42.3
0.0423
P10.5 crx+ retina
CCTCCATCCT
(
3
)
15.4
0.0154
P10.5 crx+ retina
CTTTTCAGCA
(
5
)
11.5
0.0115
P10.5 crx+ retina
CAGGGCGATG
(
5
)
7.7
0.0077
P10.5 crx+ retina
CAAGCTGCCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CGTGTTCAAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGGCTTCCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGTGTTTCA
(
2
)
1.9
0.0019
Adult retinal
CTTTTCAGCA
(
5
)
20.4
0.0204
Adult retinal
GAATTAACAT
(
2
)
16.7
0.0167
Adult retinal
CAGGGTGATG
(
4
)
13
0.013
Adult retinal
CCTCCATCCT
(
3
)
5.6
0.0056
Adult retinal
CAAGCTGCCT
(
2
)
3.7
0.0037
Adult retinal
CTGTGTTTCA
(
2
)
3.7
0.0037
ONL
GAATTAACAT
(
2
)
38.3
0.0383
ONL
CTTTTCAGCA
(
5
)
19.2
0.0192
ONL
CAGGGTGATG
(
4
)
3.8
0.0038
ONL
CTGTGTTTCA
(
2
)
3.8
0.0038
