Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244179	Herc1	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	9		235439
Human Homolog	HERC1[hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAGAAACC (2) 3.3 0.0033 P8 Cb GC AATATTCATA 1.6 0.0016 Cb medulloblastoma AAGAGAAACC (2) 131.8 0.1318 Cb medulloblastoma CAAACTTATC (2) 2.3 0.0023 P8 GC+1d culture AAGAGAAACC (2) 8 0.008 P8 GC+1d culture AATATTCATA 2.3 0.0023 P8 GC+1d culture CAAACTTATC (2) 1.1 0.0011 P8 GC+1d culture CTCTCAAGAA 1.1 0.0011 P8 GC+SHH+1d culture AAGAGAAACC (2) 3.5 0.0035 P8 GC+SHH+1d culture AATATTCATA 1.2 0.0012 P8 GC+SHH+1d culture CTCTCAAGAA 1.2 0.0012 Hypothalamus AAGAGAAACC (2) 97.8 0.0978 E12.5 retina CAAACTTATC (2) 3.8 0.0038 E12.5 retina AATATTCATA 1.9 0.0019 E14.5 retina TTCACTGGGT 1.8 0.0018 E16.5 retina AATATTCATA 1.8 0.0018 E16.5 retina CAAACTTATC (2) 1.8 0.0018 E16.5 retina CTCTCAAGAA 1.8 0.0018 E16.5 retina TTCACTGGGT 1.8 0.0018 E18.5 retina AAGAGAAACC (2) 1.8 0.0018 E18.5 retina AATATTCATA 1.8 0.0018 E18.5 retina TTCACTGGGT 1.8 0.0018 P0.5 retina AAGAGAAACC (2) 5.9 0.0059 P2.5 retina AATATTCATA 5.3 0.0053 P2.5 retina AAGAGAAACC (2) 1.8 0.0018 P2.5 retina CTCTCAAGAA 1.8 0.0018 P4.5 retina AATATTCATA 4 0.004 P4.5 retina AAGAGAAACC (2) 2 0.002 P4.5 retina TTCACTGGGT 2 0.002 P6.5 retina AAGAGAAACC (2) 18.3 0.0183 P6.5 retina AATATTCATA 1.7 0.0017 P6.5 retina TTCACTGGGT 1.7 0.0017 P10.5 crx- retina AAGAGAAACC (2) 50.2 0.0502 P10.5 crx+ retina AAGAGAAACC (2) 34.6 0.0346 Adult retinal AAGAGAAACC (2) 24.1 0.0241 ONL AAGAGAAACC (2) 5.7 0.0057 ONL AATATTCATA 3.8 0.0038