Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250641	2900003A17Rik	RIKEN cDNA 2900003A17 gene	12		72877
Mm.250641	C330002I19Rik	RIKEN cDNA C330002I19 gene	12		77480
Gene Ontology	DNA binding | integral to membrane | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	KIDINS220[likely homolog of rat kinase D-interacting substance of 220 kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAAAAA (3) 22.8 0.0228 P8 Cb GC AGAGGAGAGG (2) 1.6 0.0016 P8 Cb GC CAGCCACCCA (3) 1.6 0.0016 P8 Cb GC CTGTTTTTAC (2) 1.6 0.0016 Cb medulloblastoma CCAAAAAAAA (3) 90.2 0.0902 Cb medulloblastoma AGAGGAGAGG (2) 2.3 0.0023 Cb medulloblastoma GGCACAGCAA (2) 2.3 0.0023 P8 GC+1d culture CCAAAAAAAA (3) 38.8 0.0388 P8 GC+SHH+1d culture CCAAAAAAAA (3) 39.8 0.0398 P8 GC+SHH+1d culture CCAAAAAAAC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGTTTTTAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGCCCTTT (2) 1.2 0.0012 3T3 fibroblasts CAGCCACCCA (3) 3.5 0.0035 E15 cortex CCAAAAAAAA (3) 9.9 0.0099 E15 cortex AGAGGAGAGG (2) 4.9 0.0049 E15 cortex CAGCCACCCA (3) 4.9 0.0049 E15 cortex GGGAATCTGC (2) 4.9 0.0049 P1 cortex CCAAAAAAAA (3) 40.9 0.0409 P1 cortex CTGTTTTTAC (2) 4.5 0.0045 Hypothalamus CCAAAAAAAA (3) 38 0.038 Hypothalamus AGAGGAGAGG (2) 1.8 0.0018 Hypothalamus GGGAATCTGC (2) 1.8 0.0018 Hypothalamus TCCTGTAGCA (2) 1.8 0.0018 E12.5 retina CCAAAAAAAA (3) 16.9 0.0169 E12.5 retina CCAAAAAAAC (2) 1.9 0.0019 E14.5 retina CCAAAAAAAA (3) 18.2 0.0182 E14.5 retina CAGCCTCCTC (2) 1.8 0.0018 E16.5 retina CCAAAAAAAA (3) 16.3 0.0163 E16.5 retina AAAATGCTCA (2) 1.8 0.0018 E16.5 retina CAGCCTCCTC (2) 1.8 0.0018 E16.5 retina CTGTTTTTAC (2) 1.8 0.0018 E16.5 retina GGAGCCCTTT (2) 1.8 0.0018 E18.5 retina CCAAAAAAAA (3) 38.2 0.0382 E18.5 retina GGCACAGCAA (2) 1.8 0.0018 P0.5 retina CCAAAAAAAA (3) 29.4 0.0294 P0.5 retina GGAGCCCTTT (2) 2 0.002 P2.5 retina CCAAAAAAAA (3) 44 0.044 P2.5 retina CTGTTTTTAC (2) 1.8 0.0018 P4.5 retina CCAAAAAAAA (3) 39.6 0.0396 P6.5 retina CCAAAAAAAA (3) 38.3 0.0383 P10.5 crx- retina CCAAAAAAAA (3) 14.9 0.0149 P10.5 crx- retina CTGTTTTTAC (2) 5.6 0.0056 P10.5 crx- retina TGATGGGTAC (3) 5.6 0.0056 P10.5 crx- retina AAAATGCTCA (2) 1.9 0.0019 P10.5 crx+ retina CCAAAAAAAA (3) 38.4 0.0384 P10.5 crx+ retina AAAATGCTCA (2) 1.9 0.0019 P10.5 crx+ retina CCAAAAAAAC (2) 1.9 0.0019 Adult retinal CCAAAAAAAA (3) 35.2 0.0352 Adult retinal CAGCCTCCTC (2) 1.9 0.0019 Adult retinal CTGTTTTTAC (2) 1.9 0.0019 ONL CCAAAAAAAA (3) 7.7 0.0077 ONL GGGAATCTGC (2) 1.9 0.0019