Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.257181
Nasp
nuclear autoantigenic sperm protein (histone-binding)
4
50927
Mm.257181
A430091L06Rik
RIKEN cDNA A430091L06 gene
4
319290
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAGAGGCG
(
2
)
14.7
0.0147
P8 Cb GC
TTACAGTCAA
(
2
)
6.5
0.0065
P8 Cb GC
TTTGTGTTTT
(
3
)
6.5
0.0065
P8 Cb GC
AGCAGATGAA
(
2
)
1.6
0.0016
P8 Cb GC
ATTGCCAGTA
(
2
)
1.6
0.0016
P8 Cb GC
TAGAAGAGGA
(
2
)
1.6
0.0016
Cb medulloblastoma
TTTGTGTTTT
(
3
)
11.6
0.0116
Cb medulloblastoma
TTAAGAGGCG
(
2
)
2.3
0.0023
P8 GC+1d culture
TTTGTGTTTT
(
3
)
12.6
0.0126
P8 GC+1d culture
TTAAGAGGCG
(
2
)
8
0.008
P8 GC+1d culture
GGAGAAAAAG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGTGTTTT
(
3
)
19.9
0.0199
P8 GC+SHH+1d culture
TTAAGAGGCG
(
2
)
18.7
0.0187
P8 GC+SHH+1d culture
AGCAGATGAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGAAGAGGA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTACAGTCAA
(
2
)
1.2
0.0012
3T3 fibroblasts
TTAAGAGGCG
(
2
)
7
0.007
3T3 fibroblasts
TTTGTGTTTT
(
3
)
3.5
0.0035
E15 cortex
GGAGAAAAAG
(
5
)
4.9
0.0049
E15 cortex
TTAAGAGGCG
(
2
)
4.9
0.0049
P1 cortex
TTAAGAGGCG
(
2
)
4.5
0.0045
P1 cortex
TTTGTGTTTT
(
3
)
4.5
0.0045
Hypothalamus
TTTGTGTTTT
(
3
)
7.2
0.0072
Hypothalamus
TTACAGTCAA
(
2
)
3.6
0.0036
Hypothalamus
GATACTGAGG
(
3
)
1.8
0.0018
E12.5 retina
TTAAGAGGCG
(
2
)
35.7
0.0357
E12.5 retina
TTTGTGTTTT
(
3
)
11.3
0.0113
E12.5 retina
TAGAAGAGGA
(
2
)
1.9
0.0019
E14.5 retina
TTTGTGTTTT
(
3
)
16.4
0.0164
E14.5 retina
TTAAGAGGCG
(
2
)
7.3
0.0073
E14.5 retina
TTACAGTCAA
(
2
)
5.5
0.0055
E14.5 retina
ATTGCCAGTA
(
2
)
1.8
0.0018
E16.5 retina
TTTGTGTTTT
(
3
)
16.3
0.0163
E16.5 retina
TTAAGAGGCG
(
2
)
5.4
0.0054
E16.5 retina
TTACAGTCAA
(
2
)
5.4
0.0054
E16.5 retina
AGCAGATGAA
(
2
)
1.8
0.0018
E16.5 retina
ATTGCCAGTA
(
2
)
1.8
0.0018
E16.5 retina
GATACTGAGG
(
3
)
1.8
0.0018
E18.5 retina
TTTGTGTTTT
(
3
)
29.1
0.0291
E18.5 retina
TTAAGAGGCG
(
2
)
7.3
0.0073
E18.5 retina
TTACAGTCAA
(
2
)
7.3
0.0073
E18.5 retina
GATACTGAGG
(
3
)
1.8
0.0018
E18.5 retina
GGAGAAAAAG
(
5
)
1.8
0.0018
P0.5 retina
TTAAGAGGCG
(
2
)
17.7
0.0177
P0.5 retina
TTTGTGTTTT
(
3
)
17.7
0.0177
P0.5 retina
GATACTGAGG
(
3
)
2
0.002
P0.5 retina
TTACAGTCAA
(
2
)
2
0.002
P2.5 retina
TTAAGAGGCG
(
2
)
8.8
0.0088
P2.5 retina
TTTGTGTTTT
(
3
)
8.8
0.0088
P2.5 retina
TAGAAGAGGA
(
2
)
1.8
0.0018
P2.5 retina
TTACAGTCAA
(
2
)
1.8
0.0018
P4.5 retina
TTTGTGTTTT
(
3
)
23.8
0.0238
P4.5 retina
TTACAGTCAA
(
2
)
7.9
0.0079
P4.5 retina
TTAAGAGGCG
(
2
)
5.9
0.0059
P6.5 retina
TTAAGAGGCG
(
2
)
6.7
0.0067
P6.5 retina
TTTGTGTTTT
(
3
)
5
0.005
P6.5 retina
GATACTGAGG
(
3
)
1.7
0.0017
P6.5 retina
TTACAGTCAA
(
2
)
1.7
0.0017
P10.5 crx- retina
TTTGTGTTTT
(
3
)
14.9
0.0149
P10.5 crx- retina
TTAAGAGGCG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTTGTGTTTT
(
3
)
17.3
0.0173
P10.5 crx+ retina
TTAAGAGGCG
(
2
)
1.9
0.0019
Adult retinal
GATACTGAGG
(
3
)
3.7
0.0037
Adult retinal
TTACAGTCAA
(
2
)
1.9
0.0019
ONL
TTTGTGTTTT
(
3
)
7.7
0.0077
ONL
TTAAGAGGCG
(
2
)
3.8
0.0038
