Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258140
Dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7
11
11 60.0 cM
56354
Mm.258140
D630018G21Rik
RIKEN cDNA D630018G21 gene
11
319789
Mm.258140
C79646
expressed sequence C79646
11
97719
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCCCTGTGTA
(
3
)
4.9
0.0049
P8 Cb GC
GACCGTGCCC
(
4
)
3.3
0.0033
P8 Cb GC
CCTTTCCAGG
(
4
)
1.6
0.0016
P8 Cb GC
GACACAGAGC
(
4
)
1.6
0.0016
P8 Cb GC
GTTAAACCAA
(
3
)
1.6
0.0016
P8 Cb GC
GTTAAAGCAG
(
3
)
1.6
0.0016
Cb medulloblastoma
GACACAGAGC
(
4
)
4.6
0.0046
Cb medulloblastoma
GACCGTGCCC
(
4
)
2.3
0.0023
P8 GC+1d culture
TCCCTGTGTA
(
3
)
3.4
0.0034
P8 GC+1d culture
AAACCTGGGG
(
3
)
1.1
0.0011
P8 GC+1d culture
AGCCCCTGCC
(
3
)
1.1
0.0011
P8 GC+1d culture
GTTAAAGCAG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TCCCTGTGTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTCCAGG
(
4
)
1.2
0.0012
P1 cortex
GTTAAACCAA
(
3
)
4.5
0.0045
Hypothalamus
TCCCTGTGTA
(
3
)
1.8
0.0018
E12.5 retina
TCCCTGTGTA
(
3
)
5.6
0.0056
E14.5 retina
GTTAAAGCAG
(
3
)
3.6
0.0036
E14.5 retina
TCCCTGTGTA
(
3
)
3.6
0.0036
E16.5 retina
CCTTTCCAGG
(
4
)
1.8
0.0018
E16.5 retina
GACACAGAGC
(
4
)
1.8
0.0018
E16.5 retina
GTTAAACCAA
(
3
)
1.8
0.0018
E16.5 retina
GTTAAAGCAG
(
3
)
1.8
0.0018
E18.5 retina
AGCCCCTGCC
(
3
)
1.8
0.0018
P0.5 retina
TCCCTGTGTA
(
3
)
3.9
0.0039
P0.5 retina
GACACAGAGC
(
4
)
2
0.002
P2.5 retina
CCTTTCCAGG
(
4
)
1.8
0.0018
P2.5 retina
GTTAAAGCAG
(
3
)
1.8
0.0018
P4.5 retina
AAACCTGGGG
(
3
)
2
0.002
P4.5 retina
GTTAAACCAA
(
3
)
2
0.002
P4.5 retina
TCCCTGTGTA
(
3
)
2
0.002
P6.5 retina
TCCCTGTGTA
(
3
)
11.7
0.0117
P6.5 retina
CCTTTCCAGG
(
4
)
3.3
0.0033
P6.5 retina
AAACCTGGGG
(
3
)
1.7
0.0017
P10.5 crx- retina
TCCCTGTGTA
(
3
)
5.6
0.0056
P10.5 crx- retina
AGCCCCTGCC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TCCCTGTGTA
(
3
)
7.7
0.0077
P10.5 crx+ retina
GTTAAACCAA
(
3
)
1.9
0.0019
Adult retinal
TCCCTGTGTA
(
3
)
1.9
0.0019
ONL
TCCCTGTGTA
(
3
)
1.9
0.0019
