Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259035
D030028O16Rik
RIKEN cDNA D030028O16 gene
17
213760
Human Homolog
KIAA0436[putative prolyl oligopeptidase]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCACAGAGCT
(
6
)
22.8
0.0228
P8 Cb GC
GAGTAGACTC
(
4
)
1.6
0.0016
P8 Cb GC
GGAAAATAAA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCACAGAGCT
(
6
)
9.2
0.0092
Cb medulloblastoma
GAGTAGACTC
(
4
)
2.3
0.0023
P8 GC+1d culture
CCACAGAGCT
(
6
)
43.4
0.0434
P8 GC+1d culture
GAAATAATAA
1.1
0.0011
P8 GC+SHH+1d culture
CCACAGAGCT
(
6
)
19.9
0.0199
P8 GC+SHH+1d culture
GAAATAATAA
1.2
0.0012
3T3 fibroblasts
CCACAGAGCT
(
6
)
10.5
0.0105
E15 cortex
CCACAGAGCT
(
6
)
39.6
0.0396
P1 cortex
CCACAGAGCT
(
6
)
18.2
0.0182
Hypothalamus
CCACAGAGCT
(
6
)
16.3
0.0163
Hypothalamus
GGGGGTTGGG
(
2
)
7.2
0.0072
Hypothalamus
GAAATAATAA
1.8
0.0018
Hypothalamus
GAGTAGACTC
(
4
)
1.8
0.0018
Hypothalamus
GGAAAATAAA
(
2
)
1.8
0.0018
E12.5 retina
CCACAGAGCT
(
6
)
16.9
0.0169
E14.5 retina
CCACAGAGCT
(
6
)
31
0.031
E16.5 retina
CCACAGAGCT
(
6
)
50.7
0.0507
E16.5 retina
GAAATAATAA
1.8
0.0018
E16.5 retina
GAGTAGACTC
(
4
)
1.8
0.0018
E18.5 retina
CCACAGAGCT
(
6
)
27.3
0.0273
P0.5 retina
CCACAGAGCT
(
6
)
29.4
0.0294
P0.5 retina
GAGTAGACTC
(
4
)
2
0.002
P2.5 retina
CCACAGAGCT
(
6
)
22.9
0.0229
P2.5 retina
GAAATAATAA
1.8
0.0018
P2.5 retina
GGAAAATAAA
(
2
)
1.8
0.0018
P4.5 retina
CCACAGAGCT
(
6
)
23.8
0.0238
P4.5 retina
GAAATAATAA
4
0.004
P6.5 retina
CCACAGAGCT
(
6
)
28.3
0.0283
P10.5 crx- retina
CCACAGAGCT
(
6
)
61.3
0.0613
P10.5 crx- retina
GAAATAATAA
1.9
0.0019
P10.5 crx- retina
GAGTAGACTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
CCACAGAGCT
(
6
)
15.4
0.0154
P10.5 crx+ retina
GAAATAATAA
3.8
0.0038
Adult retinal
CCACAGAGCT
(
6
)
14.8
0.0148
ONL
GGGGGTTGGG
(
2
)
15.3
0.0153
ONL
CCACAGAGCT
(
6
)
7.7
0.0077
ONL
GAAATAATAA
1.9
0.0019
