Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261750	B430306D02Rik	RIKEN cDNA B430306D02 gene	X	X 38.0 cM	270627
Gene Ontology	transcription factor TFIID complex
Human Homolog	TAF1[TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATGTCCT 13.1 0.0131 P8 Cb GC GAATCTCTCC 3.3 0.0033 P8 GC+1d culture TAAATGTCCT 8 0.008 P8 GC+1d culture GAATCTCTCC 4.6 0.0046 P8 GC+1d culture TATGATTCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAATGTCCT 10.5 0.0105 P8 GC+SHH+1d culture TATGATTCAG (2) 3.5 0.0035 P8 GC+SHH+1d culture GAATCTCTCC 1.2 0.0012 E15 cortex TATGATTCAG (2) 4.9 0.0049 Hypothalamus TAAATGTCCT 5.4 0.0054 Hypothalamus TATGATTCAG (2) 1.8 0.0018 E12.5 retina TAAATGTCCT 16.9 0.0169 E12.5 retina GAATCTCTCC 1.9 0.0019 E12.5 retina TATGATTCAG (2) 1.9 0.0019 E14.5 retina TAAATGTCCT 3.6 0.0036 E14.5 retina TATGATTCAG (2) 1.8 0.0018 E16.5 retina TAAATGTCCT 12.7 0.0127 E16.5 retina TATGATTCAG (2) 3.6 0.0036 E16.5 retina GAATCTCTCC 1.8 0.0018 E18.5 retina TAAATGTCCT 7.3 0.0073 E18.5 retina TATGATTCAG (2) 1.8 0.0018 P0.5 retina TAAATGTCCT 9.8 0.0098 P0.5 retina TATGATTCAG (2) 3.9 0.0039 P2.5 retina TAAATGTCCT 17.6 0.0176 P4.5 retina TAAATGTCCT 4 0.004 P4.5 retina TATGATTCAG (2) 2 0.002 P6.5 retina TAAATGTCCT 15 0.015 P6.5 retina TATGATTCAG (2) 3.3 0.0033 P10.5 crx- retina TAAATGTCCT 5.6 0.0056 P10.5 crx- retina TATGATTCAG (2) 3.7 0.0037 P10.5 crx+ retina TAAATGTCCT 7.7 0.0077 P10.5 crx+ retina TATGATTCAG (2) 1.9 0.0019 Adult retinal TAAATGTCCT 3.7 0.0037 ONL TAAATGTCCT 13.4 0.0134