Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262294	AW556556	expressed sequence AW556556	17		106817
Mm.262294	Dep1	diabetic embryopathy 1	17		170624
Mm.262294	Qk	quaking	17	17 5.9 cM	19317
Gene Ontology	cytoplasm | locomotory behavior | muscle cell differentiation | nerve ensheathment | nucleic acid binding | nucleus | RNA binding | spermatogenesis | vasculogenesis
Human Homolog	QKI[quaking homolog, KH domain RNA binding (mouse)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTTTGTAA (3) 11.4 0.0114 P8 Cb GC ACTTTTGGAA (4) 4.9 0.0049 P8 Cb GC TAATGAAATT (3) 3.3 0.0033 P8 Cb GC CTGTGTATGT (3) 1.6 0.0016 P8 Cb GC GCTTTTACAT (3) 1.6 0.0016 P8 Cb GC GTGACCTCTC (3) 1.6 0.0016 Cb medulloblastoma TTGTTTGTAA (3) 23.1 0.0231 Cb medulloblastoma TCAAGTGAGC (3) 16.2 0.0162 Cb medulloblastoma TAATTTTGGA (4) 4.6 0.0046 Cb medulloblastoma ACTTTTGGAA (4) 2.3 0.0023 Cb medulloblastoma TAAGATAATG (3) 2.3 0.0023 P8 GC+1d culture TAAGATAATG (3) 4.6 0.0046 P8 GC+1d culture GTGACCTCTC (3) 1.1 0.0011 P8 GC+1d culture TAATGAAATT (3) 1.1 0.0011 P8 GC+1d culture TTGTTTGTAA (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGACCTCTC (3) 3.5 0.0035 P8 GC+SHH+1d culture TTGTTTGTAA (3) 3.5 0.0035 P8 GC+SHH+1d culture TAAGATAATG (3) 1.2 0.0012 P8 GC+SHH+1d culture TAATGAAATT (3) 1.2 0.0012 P8 GC+SHH+1d culture TAATTTTGGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCAAGTGAGC (3) 1.2 0.0012 E15 cortex TAATGAAATT (3) 9.9 0.0099 E15 cortex ACTTTTGGAA (4) 4.9 0.0049 P1 cortex TAATGAAATT (3) 18.2 0.0182 P1 cortex CTGTGTATGT (3) 4.5 0.0045 Hypothalamus TTGTTTGTAA (3) 14.5 0.0145 Hypothalamus TCAAGTGAGC (3) 5.4 0.0054 Hypothalamus ACTTTTGGAA (4) 1.8 0.0018 Hypothalamus CCTGCCTGCT (4) 1.8 0.0018 Hypothalamus GCTTTTACAT (3) 1.8 0.0018 Hypothalamus GTGACCTCTC (3) 1.8 0.0018 Hypothalamus TAAGATAATG (3) 1.8 0.0018 E12.5 retina TAAGATAATG (3) 5.6 0.0056 E12.5 retina TTGTTTGTAA (3) 5.6 0.0056 E12.5 retina ACTTTTGGAA (4) 3.8 0.0038 E12.5 retina TCAAGTGAGC (3) 3.8 0.0038 E12.5 retina GCAGAGGATG (4) 1.9 0.0019 E14.5 retina GCAGAGGATG (4) 1.8 0.0018 E14.5 retina TAAGATAATG (3) 1.8 0.0018 E16.5 retina TAAGATAATG (3) 1.8 0.0018 E16.5 retina TAATGAAATT (3) 1.8 0.0018 E18.5 retina TTGTTTGTAA (3) 5.5 0.0055 E18.5 retina TAAGATAATG (3) 3.6 0.0036 E18.5 retina CCTGCCTGCT (4) 1.8 0.0018 E18.5 retina GCTTTTACAT (3) 1.8 0.0018 E18.5 retina TAATGAAATT (3) 1.8 0.0018 P0.5 retina GTGACCTCTC (3) 3.9 0.0039 P0.5 retina GCTTTTACAT (3) 2 0.002 P0.5 retina TAATGAAATT (3) 2 0.002 P0.5 retina TCAAGTGAGC (3) 2 0.002 P0.5 retina TTGTTTGTAA (3) 2 0.002 P2.5 retina TAAGATAATG (3) 5.3 0.0053 P2.5 retina TTGTTTGTAA (3) 5.3 0.0053 P2.5 retina ACTTTTGGAA (4) 1.8 0.0018 P2.5 retina GCTTTTACAT (3) 1.8 0.0018 P2.5 retina TAATGAAATT (3) 1.8 0.0018 P2.5 retina TCAAGTGAGC (3) 1.8 0.0018 P4.5 retina TTGTTTGTAA (3) 7.9 0.0079 P4.5 retina CCTGCCTGCT (4) 2 0.002 P6.5 retina TTGTTTGTAA (3) 3.3 0.0033 P6.5 retina TAAGATAATG (3) 1.7 0.0017 P6.5 retina TAATGAAATT (3) 1.7 0.0017 P10.5 crx- retina ACTTTTGGAA (4) 1.9 0.0019 P10.5 crx+ retina TAATGAAATT (3) 1.9 0.0019 P10.5 crx+ retina TTGTTTGTAA (3) 1.9 0.0019 ONL CTGTGTATGT (3) 1.9 0.0019