Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268737
Csnb
casein beta
5
5 44.91 cM
12991
Gene Ontology
extracellular
|
extracellular space
|
transport
|
transporter activity
Human Homolog
CSN2[casein beta]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 101 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAGCAAAGA
(
2
)
17.9
0.0179
P8 Cb GC
CTGCACCAAT
3.3
0.0033
P8 Cb GC
CTTACCAAAA
1.6
0.0016
P8 Cb GC
CTTATCCTCA
1.6
0.0016
P8 Cb GC
GGAAGAAAGA
(
2
)
1.6
0.0016
Cb medulloblastoma
GAAGCAAAGA
(
2
)
46.2
0.0462
Cb medulloblastoma
CTTATCCTCA
13.9
0.0139
Cb medulloblastoma
CTACAAAAAA
2.3
0.0023
Cb medulloblastoma
CTGCACCAAT
2.3
0.0023
Cb medulloblastoma
GGAAAATGCT
2.3
0.0023
Cb medulloblastoma
GGAAGAAAGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GAAGCAAAGA
(
2
)
20.5
0.0205
P8 GC+1d culture
CTGCACCAAT
3.4
0.0034
P8 GC+1d culture
CTTATCCTCA
3.4
0.0034
P8 GC+1d culture
CTACAAAAAA
2.3
0.0023
P8 GC+1d culture
GCATTCATTT
(
2
)
1.1
0.0011
P8 GC+1d culture
GGAAGAAAGA
(
2
)
1.1
0.0011
P8 GC+1d culture
TCAGTAAAGT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAGCAAAGA
(
2
)
17.6
0.0176
P8 GC+SHH+1d culture
CTTATCCTCA
2.3
0.0023
P8 GC+SHH+1d culture
TCAGTAAAGT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTCAAATT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTACAAAAAA
1.2
0.0012
P8 GC+SHH+1d culture
CTGCACCAAT
1.2
0.0012
P8 GC+SHH+1d culture
CTTACCAAAA
1.2
0.0012
P8 GC+SHH+1d culture
GGAAAATGCT
1.2
0.0012
P8 GC+SHH+1d culture
GTCATCAACA
1.2
0.0012
3T3 fibroblasts
GAAGCAAAGA
(
2
)
10.5
0.0105
3T3 fibroblasts
CTTATCCTCA
3.5
0.0035
E15 cortex
GAAGCAAAGA
(
2
)
9.9
0.0099
P1 cortex
GAAGCAAAGA
(
2
)
9.1
0.0091
P1 cortex
CTGCACCAAT
4.5
0.0045
P1 cortex
GGAAGAAAGA
(
2
)
4.5
0.0045
Hypothalamus
GAAGCAAAGA
(
2
)
38
0.038
Hypothalamus
CTTATCCTCA
5.4
0.0054
Hypothalamus
CTTACCAAAA
3.6
0.0036
Hypothalamus
TCAGTAAAGT
(
3
)
3.6
0.0036
Hypothalamus
CCTTCAAATT
(
3
)
1.8
0.0018
Hypothalamus
GGAAAATGCT
1.8
0.0018
Hypothalamus
TTCCCAACTT
1.8
0.0018
E12.5 retina
GAAGCAAAGA
(
2
)
18.8
0.0188
E12.5 retina
TCAGTAAAGT
(
3
)
5.6
0.0056
E12.5 retina
CTTATCCTCA
3.8
0.0038
E12.5 retina
CTACAAAAAA
1.9
0.0019
E12.5 retina
GGAAGAAAGA
(
2
)
1.9
0.0019
E14.5 retina
GAAGCAAAGA
(
2
)
27.3
0.0273
E14.5 retina
CTTATCCTCA
1.8
0.0018
E14.5 retina
TCAGTAAAGT
(
3
)
1.8
0.0018
E14.5 retina
TTTTTTTTCA
(
2
)
1.8
0.0018
E16.5 retina
GAAGCAAAGA
(
2
)
52.5
0.0525
E16.5 retina
CTTATCCTCA
3.6
0.0036
E16.5 retina
TTTTTTTTCA
(
2
)
1.8
0.0018
E18.5 retina
GAAGCAAAGA
(
2
)
29.1
0.0291
E18.5 retina
CTACAAAAAA
3.6
0.0036
E18.5 retina
TTTTTTTTCA
(
2
)
3.6
0.0036
E18.5 retina
CCTTCAAATT
(
3
)
1.8
0.0018
E18.5 retina
GACTCTTTTT
(
2
)
1.8
0.0018
E18.5 retina
GGAAAATGCT
1.8
0.0018
E18.5 retina
GGAAGAAAGA
(
2
)
1.8
0.0018
E18.5 retina
TCAGTAAAGT
(
3
)
1.8
0.0018
P0.5 retina
GAAGCAAAGA
(
2
)
17.7
0.0177
P0.5 retina
CTTATCCTCA
5.9
0.0059
P0.5 retina
CTACAAAAAA
2
0.002
P2.5 retina
GAAGCAAAGA
(
2
)
72.2
0.0722
P2.5 retina
GGAAGAAAGA
(
2
)
3.5
0.0035
P2.5 retina
CTACAAAAAA
1.8
0.0018
P4.5 retina
GAAGCAAAGA
(
2
)
71.3
0.0713
P4.5 retina
CTTATCCTCA
5.9
0.0059
P4.5 retina
TCAGTAAAGT
(
3
)
5.9
0.0059
P4.5 retina
GGAAGAAAGA
(
2
)
4
0.004
P4.5 retina
TTCCCAACTT
2
0.002
P6.5 retina
GAAGCAAAGA
(
2
)
68.4
0.0684
P6.5 retina
CTTATCCTCA
3.3
0.0033
P6.5 retina
TCAGTAAAGT
(
3
)
3.3
0.0033
P6.5 retina
CTACAAAAAA
1.7
0.0017
P6.5 retina
GACTCTTTTT
(
2
)
1.7
0.0017
P6.5 retina
GGAAGAAAGA
(
2
)
1.7
0.0017
P6.5 retina
TTCCCAACTT
1.7
0.0017
P10.5 crx- retina
GAAGCAAAGA
(
2
)
94.7
0.0947
P10.5 crx- retina
GACTCTATAT
18.6
0.0186
P10.5 crx- retina
GCATTCATTT
(
2
)
1.9
0.0019
P10.5 crx- retina
GGAAAATGCT
1.9
0.0019
P10.5 crx- retina
TTTTTTTTCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAAGCAAAGA
(
2
)
75
0.075
P10.5 crx+ retina
CTACAAAAAA
1.9
0.0019
P10.5 crx+ retina
CTTATCCTCA
1.9
0.0019
P10.5 crx+ retina
GACTCCATTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGAAAATGCT
1.9
0.0019
P10.5 crx+ retina
GTCATCAACA
1.9
0.0019
P10.5 crx+ retina
TCAGTAAAGT
(
3
)
1.9
0.0019
Adult retinal
GAAGCAAAGA
(
2
)
13
0.013
Adult retinal
CTTATCCTCA
5.6
0.0056
Adult retinal
TCAGTAAAGT
(
3
)
5.6
0.0056
Adult retinal
CTGCACCAAT
3.7
0.0037
Adult retinal
GGAAGAAAGA
(
2
)
1.9
0.0019
ONL
GAAGCAAAGA
(
2
)
26.8
0.0268
ONL
GCATTCATTT
(
2
)
5.7
0.0057
ONL
TCAGTAAAGT
(
3
)
3.8
0.0038
ONL
CTTATCCTCA
1.9
0.0019
ONL
GACTCTTTTT
(
2
)
1.9
0.0019
ONL
GTCATCAACA
1.9
0.0019
