Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271642	AI845704	expressed sequence AI845704	1		98447
Mm.271642	Ipo9	importin 9	1	1 E4	226432
Gene Ontology	cytoplasm | histone binding | nuclear pore | nucleus | protein stabilization | protein transport | protein transporter activity | protein-nucleus import | protein-nucleus import, docking | RAN protein binding | ribosomal protein-nucleus import | ribosome biogenesis and assembly | transport
Human Homolog	IPO9[importin 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTGTTCA (2) 8.2 0.0082 P8 Cb GC TATTTTTCTA (4) 4.9 0.0049 P8 Cb GC TATTTTTTTA (4) 3.3 0.0033 P8 Cb GC GGTCACTTTT (2) 1.6 0.0016 P8 Cb GC TTGGAACCTA (2) 1.6 0.0016 Cb medulloblastoma GGTTTGTTCA (2) 6.9 0.0069 Cb medulloblastoma GAGGCCAATG (3) 2.3 0.0023 Cb medulloblastoma TATTTTTCTA (4) 2.3 0.0023 P8 GC+1d culture GGTTTGTTCA (2) 5.7 0.0057 P8 GC+1d culture TATTTTTCTA (4) 3.4 0.0034 P8 GC+1d culture CATACACAAA (2) 1.1 0.0011 P8 GC+1d culture GAGGCCAATG (3) 1.1 0.0011 P8 GC+1d culture TATTTTTTTA (4) 1.1 0.0011 P8 GC+SHH+1d culture GGTTTGTTCA (2) 10.5 0.0105 P8 GC+SHH+1d culture TATTTTTCTA (4) 10.5 0.0105 P8 GC+SHH+1d culture TATTTTTTTA (4) 3.5 0.0035 P8 GC+SHH+1d culture TTGGAACCTA (2) 1.2 0.0012 3T3 fibroblasts GGTTTGTTCA (2) 3.5 0.0035 E15 cortex GGTTTGTTCA (2) 14.8 0.0148 E15 cortex GGTCACTTTT (2) 4.9 0.0049 P1 cortex GGTTTGTTCA (2) 13.6 0.0136 P1 cortex TATTTTTCTA (4) 9.1 0.0091 P1 cortex CATACACAAA (2) 4.5 0.0045 Hypothalamus CATACACAAA (2) 3.6 0.0036 Hypothalamus GGTTTGTTCA (2) 3.6 0.0036 Hypothalamus GAGGCCAATG (3) 1.8 0.0018 E12.5 retina TATTTTTCTA (4) 15 0.015 E12.5 retina CATACACAAA (2) 5.6 0.0056 E12.5 retina GGTTTGTTCA (2) 5.6 0.0056 E14.5 retina TATTTTTCTA (4) 16.4 0.0164 E14.5 retina TATTTTTTTA (4) 7.3 0.0073 E14.5 retina GAGGCCAATG (3) 1.8 0.0018 E14.5 retina GGTTTGTTCA (2) 1.8 0.0018 E14.5 retina GTTCACTTTT (3) 1.8 0.0018 E16.5 retina GGTTTGTTCA (2) 12.7 0.0127 E16.5 retina TATTTTTCTA (4) 1.8 0.0018 E18.5 retina GGTTTGTTCA (2) 9.1 0.0091 E18.5 retina GTTCACTTTT (3) 5.5 0.0055 E18.5 retina TATTTTTCTA (4) 5.5 0.0055 E18.5 retina CATACACAAA (2) 1.8 0.0018 E18.5 retina GGTCACTTTT (2) 1.8 0.0018 P0.5 retina TATTTTTCTA (4) 7.9 0.0079 P0.5 retina GGTTTGTTCA (2) 5.9 0.0059 P0.5 retina GTTCACTTTT (3) 3.9 0.0039 P0.5 retina TATTTTTTTA (4) 2 0.002 P2.5 retina GGTTTGTTCA (2) 12.3 0.0123 P2.5 retina TATTTTTCTA (4) 7 0.007 P2.5 retina CATACACAAA (2) 1.8 0.0018 P2.5 retina TATTTTTTTA (4) 1.8 0.0018 P4.5 retina GGTTTGTTCA (2) 7.9 0.0079 P4.5 retina TATTTTTCTA (4) 7.9 0.0079 P4.5 retina GAGGCCAATG (3) 2 0.002 P4.5 retina TATTTTTTTA (4) 2 0.002 P6.5 retina TATTTTTCTA (4) 11.7 0.0117 P6.5 retina GGTTTGTTCA (2) 6.7 0.0067 P6.5 retina CATACACAAA (2) 1.7 0.0017 P6.5 retina GGTCACTTTT (2) 1.7 0.0017 P10.5 crx- retina GGTTTGTTCA (2) 5.6 0.0056 P10.5 crx- retina TATTTTTCTA (4) 1.9 0.0019 P10.5 crx+ retina GGTTTGTTCA (2) 9.6 0.0096 P10.5 crx+ retina CATACACAAA (2) 3.8 0.0038 P10.5 crx+ retina TTGGAACCTA (2) 1.9 0.0019 Adult retinal TATTTTTCTA (4) 5.6 0.0056 Adult retinal GGTTTGTTCA (2) 3.7 0.0037 Adult retinal GGTCACTTTT (2) 1.9 0.0019 ONL GGTTTGTTCA (2) 3.8 0.0038 ONL CATACACAAA (2) 1.9 0.0019 ONL TATTTTTCTA (4) 1.9 0.0019