Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272361	Psmc5	protease (prosome, macropain) 26S subunit, ATPase 5	11		19184
Gene Ontology	ATP binding | ATPase activity | cytoplasm | cytosol | hydrolase activity | negative regulation of transcription | nucleotide binding | nucleus | proteasome complex (sensu Eukarya) | protein binding | protein catabolism | transcription cofactor activity | transcription factor binding | transcription factor TFIIH complex | transcription from Pol II promoter
Human Homolog	PSMC5[proteasome (prosome, macropain) 26S subunit, ATPase, 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCATCAAGA (2) 9.8 0.0098 Cb medulloblastoma TCCATCAAGA (2) 9.2 0.0092 Cb medulloblastoma GCTACTAATA 2.3 0.0023 P8 GC+1d culture TCCATCAAGA (2) 22.8 0.0228 P8 GC+1d culture GCTACTAATA 1.1 0.0011 P8 GC+SHH+1d culture TCCATCAAGA (2) 17.6 0.0176 P8 GC+SHH+1d culture TCCAATCAAA (2) 1.2 0.0012 3T3 fibroblasts TCCATCAAGA (2) 10.5 0.0105 E15 cortex TCCATCAAGA (2) 4.9 0.0049 P1 cortex TCCATCAAGA (2) 4.5 0.0045 Hypothalamus TCCATCAAGA (2) 21.7 0.0217 E12.5 retina TCCATCAAGA (2) 35.7 0.0357 E14.5 retina TCCATCAAGA (2) 21.9 0.0219 E16.5 retina TCCATCAAGA (2) 18.1 0.0181 E16.5 retina TCCAATCAAA (2) 1.8 0.0018 E18.5 retina TCCATCAAGA (2) 5.5 0.0055 E18.5 retina TCCAATCAAA (2) 1.8 0.0018 P0.5 retina TCCATCAAGA (2) 5.9 0.0059 P0.5 retina GCTACTAATA 2 0.002 P2.5 retina TCCATCAAGA (2) 21.1 0.0211 P4.5 retina TCCATCAAGA (2) 21.8 0.0218 P6.5 retina TCCATCAAGA (2) 26.7 0.0267 P10.5 crx- retina TCCATCAAGA (2) 11.1 0.0111 P10.5 crx+ retina TCCATCAAGA (2) 15.4 0.0154 Adult retinal TCCATCAAGA (2) 16.7 0.0167 Adult retinal GCTACTAATA 1.9 0.0019 ONL TCCATCAAGA (2) 9.6 0.0096