Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277327	H13	histocompatibility 13	2	2 86.0 cM	14950
Gene Ontology	D-alanyl-D-alanine endopeptidase activity | endoplasmic reticulum | endoplasmic reticulum membrane | hydrolase activity | integral to membrane | peptidase activity
Human Homolog	HM13[histocompatibility (minor) 13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCGCTAGGC (2) 19.6 0.0196 P8 Cb GC AAGACAATAC 3.3 0.0033 Cb medulloblastoma GCCGCTAGGC (2) 16.2 0.0162 Cb medulloblastoma GCCGTTAGGC 2.3 0.0023 Cb medulloblastoma GGATGAGTTT 2.3 0.0023 P8 GC+1d culture GCCGCTAGGC (2) 29.7 0.0297 P8 GC+1d culture AAGACAATAC 3.4 0.0034 P8 GC+1d culture TGGCCAGCAT 2.3 0.0023 P8 GC+1d culture AAGACATATA (2) 1.1 0.0011 P8 GC+1d culture GCCGTTAGGC 1.1 0.0011 P8 GC+1d culture GGATGAGTTT 1.1 0.0011 P8 GC+SHH+1d culture GCCGCTAGGC (2) 19.9 0.0199 P8 GC+SHH+1d culture TGGCCAGCAT 2.3 0.0023 P8 GC+SHH+1d culture AAGACAATAC 1.2 0.0012 P8 GC+SHH+1d culture AAGACATATA (2) 1.2 0.0012 P8 GC+SHH+1d culture AGTCATTTTG 1.2 0.0012 P8 GC+SHH+1d culture GCCGTTAGGC 1.2 0.0012 3T3 fibroblasts GCCGCTAGGC (2) 28 0.028 3T3 fibroblasts GCGCTGCTGC 7 0.007 E15 cortex GCCGCTAGGC (2) 29.7 0.0297 E15 cortex TGGCCAGCAT 4.9 0.0049 P1 cortex GCCGCTAGGC (2) 9.1 0.0091 P1 cortex AGTCATTTTG 4.5 0.0045 Hypothalamus GCCGCTAGGC (2) 7.2 0.0072 Hypothalamus AAGACAATAC 3.6 0.0036 Hypothalamus AAGACATATA (2) 1.8 0.0018 E12.5 retina GCCGCTAGGC (2) 7.5 0.0075 E12.5 retina AAGACAATAC 1.9 0.0019 E12.5 retina TGGCCAGCAT 1.9 0.0019 E14.5 retina GCCGCTAGGC (2) 18.2 0.0182 E14.5 retina AAGACAATAC 7.3 0.0073 E16.5 retina GCCGCTAGGC (2) 27.2 0.0272 E16.5 retina AAGACAATAC 1.8 0.0018 E16.5 retina CTGGGTAAAA 1.8 0.0018 E16.5 retina GGATGAGTTT 1.8 0.0018 E18.5 retina GCCGCTAGGC (2) 29.1 0.0291 E18.5 retina AAGACAATAC 1.8 0.0018 E18.5 retina CTGGGTAAAA 1.8 0.0018 P0.5 retina GCCGCTAGGC (2) 15.7 0.0157 P0.5 retina AAGACAATAC 3.9 0.0039 P2.5 retina GCCGCTAGGC (2) 17.6 0.0176 P2.5 retina AGTCATTTTG 3.5 0.0035 P2.5 retina AAGACAATAC 1.8 0.0018 P2.5 retina AAGACATATA (2) 1.8 0.0018 P4.5 retina GCCGCTAGGC (2) 23.8 0.0238 P4.5 retina AAGACATATA (2) 4 0.004 P6.5 retina GCCGCTAGGC (2) 28.3 0.0283 P6.5 retina CTGGGTAAAA 3.3 0.0033 P6.5 retina AAGACAATAC 1.7 0.0017 P6.5 retina AAGACATATA (2) 1.7 0.0017 P6.5 retina GCGCTGCTGC 1.7 0.0017 P10.5 crx- retina GCCGCTAGGC (2) 14.9 0.0149 P10.5 crx- retina AAGACAATAC 7.4 0.0074 P10.5 crx- retina AAGACATATA (2) 1.9 0.0019 P10.5 crx+ retina GCCGCTAGGC (2) 26.9 0.0269 P10.5 crx+ retina AAGACAATAC 7.7 0.0077 P10.5 crx+ retina TGGCCAGCAT 1.9 0.0019 Adult retinal GCCGCTAGGC (2) 13 0.013 Adult retinal GGATGAGTTT 3.7 0.0037 Adult retinal GCGCTGCTGC 1.9 0.0019 ONL GCCGCTAGGC (2) 5.7 0.0057 ONL AAGACAATAC 1.9 0.0019