Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277792	Col1a2	procollagen, type I, alpha 2	6	6 0.68 cM	12843
Gene Ontology	cell adhesion | collagen | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | phosphate transport
Human Homolog	COL1A2[collagen, type I, alpha 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTCCAAAGA 6.5 0.0065 P8 Cb GC AACATTCGCA 4.9 0.0049 P8 Cb GC AACATTAAAA (2) 3.3 0.0033 P8 Cb GC AACATTCAAA (2) 3.3 0.0033 P8 Cb GC CGCCTGCTAG 1.6 0.0016 P8 GC+1d culture AACATTCAAA (2) 2.3 0.0023 P8 GC+1d culture AACATTCGCA 2.3 0.0023 P8 GC+1d culture GGTTTCTTTT (2) 2.3 0.0023 P8 GC+1d culture CGCCTGCTAG 1.1 0.0011 P8 GC+1d culture GTTCCAAAGA 1.1 0.0011 P8 GC+1d culture TCTTCTATGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTTCCAAAGA 3.5 0.0035 P8 GC+SHH+1d culture AACATTCGCA 2.3 0.0023 P8 GC+SHH+1d culture AACATTCAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGATTCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGTTTCTTTT (2) 1.2 0.0012 3T3 fibroblasts CGCCTGCTAG 427.6 0.4276 3T3 fibroblasts GTTCCAAAGA 31.5 0.0315 3T3 fibroblasts GAAGGATTCA (2) 14 0.014 3T3 fibroblasts TCTTCTATGC (2) 14 0.014 3T3 fibroblasts AACATTCGCA 7 0.007 3T3 fibroblasts AACATTCAAA (2) 3.5 0.0035 P1 cortex GGTTTCTTTT (2) 4.5 0.0045 Hypothalamus AACATTCAAA (2) 1.8 0.0018 E12.5 retina AACATTCAAA (2) 1.9 0.0019 E12.5 retina AACATTCGCA 1.9 0.0019 E14.5 retina AACATTAAAA (2) 1.8 0.0018 E14.5 retina GAAGGATTCA (2) 1.8 0.0018 E16.5 retina GGTTTCTTTT (2) 1.8 0.0018 P2.5 retina GTTCCAAAGA 3.5 0.0035 P2.5 retina AACATTAAAA (2) 1.8 0.0018 P6.5 retina AACATTAAAA (2) 1.7 0.0017 P10.5 crx- retina GAAGGATTCA (2) 1.9 0.0019 P10.5 crx+ retina AACATTCAAA (2) 1.9 0.0019 P10.5 crx+ retina AACATTCGCA 1.9 0.0019 P10.5 crx+ retina GGTTTCTTTT (2) 1.9 0.0019