Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28160	C79375	EST C79375			107644
Mm.28160	R75405	expressed sequence R75405	13		97912
Mm.28160	Snx27	sorting nexin family member 27	3		76742
Human Homolog	SNX27[sorting nexin family member 27]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGACAGTA (3) 4.9 0.0049 Cb medulloblastoma TCAGACAGTA (3) 2.3 0.0023 P8 GC+1d culture TCAGACAGTA (3) 2.3 0.0023 P8 GC+1d culture ACCTCTCTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture ACCTCTCTCT (5) 2.3 0.0023 P8 GC+SHH+1d culture CTGTTCCTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCAGACAGTA (3) 1.2 0.0012 E15 cortex CTGTTCCTGA (3) 4.9 0.0049 P1 cortex TCAGACAGTA (3) 4.5 0.0045 Hypothalamus ACCTCTCTCT (5) 3.6 0.0036 Hypothalamus GCTGGGAGGC (3) 1.8 0.0018 Hypothalamus TCAGACAGTA (3) 1.8 0.0018 E12.5 retina TCAGACAGTA (3) 5.6 0.0056 E12.5 retina CTGTTCCTGA (3) 1.9 0.0019 E14.5 retina CTGTTCCTGA (3) 1.8 0.0018 E18.5 retina TCAGACAGTA (3) 3.6 0.0036 E18.5 retina ACCTCTCTCT (5) 1.8 0.0018 E18.5 retina CACACTTATA (3) 1.8 0.0018 E18.5 retina CTGTTCCTGA (3) 1.8 0.0018 P0.5 retina CACACTTATA (3) 3.9 0.0039 P2.5 retina CTGTTCCTGA (3) 1.8 0.0018 P4.5 retina CACACTTATA (3) 4 0.004 P4.5 retina ACCTCTCTCT (5) 2 0.002 P6.5 retina TCAGACAGTA (3) 3.3 0.0033 P10.5 crx- retina CTGTTCCTGA (3) 1.9 0.0019 P10.5 crx- retina TCAGACAGTA (3) 1.9 0.0019 P10.5 crx+ retina CACACTTATA (3) 3.8 0.0038 P10.5 crx+ retina TCAGACAGTA (3) 1.9 0.0019 Adult retinal CACACTTATA (3) 1.9 0.0019 Adult retinal GCTGGGAGGC (3) 1.9 0.0019 ONL GCTGGGAGGC (3) 1.9 0.0019