Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.288962
AI481320
expressed sequence AI481320
11
103756
Mm.288962
Nup88
nucleoporin 88
11
11 42.0 cM
19069
Gene Ontology
nucleus
|
protein transport
|
transport
Human Homolog
NUP88[nucleoporin 88kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCACCTTCTG
(
2
)
6.5
0.0065
P8 Cb GC
CCCTTAAGAA
(
4
)
3.3
0.0033
P8 Cb GC
AAGAAAGAGT
(
2
)
1.6
0.0016
P8 Cb GC
ATTTCGGATG
(
2
)
1.6
0.0016
P8 Cb GC
TGGGTGTTAG
(
2
)
1.6
0.0016
Cb medulloblastoma
CCCTTAAGAA
(
4
)
6.9
0.0069
Cb medulloblastoma
TCACCTTCTG
(
2
)
4.6
0.0046
Cb medulloblastoma
TGGGTGTTAG
(
2
)
2.3
0.0023
P8 GC+1d culture
TCACCTTCTG
(
2
)
11.4
0.0114
P8 GC+1d culture
CCCTTAAGAA
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGGTGTTAG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TCACCTTCTG
(
2
)
7
0.007
P8 GC+SHH+1d culture
CCCTTAAGAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGGTGTTAG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAGCTGGCGT
(
2
)
3.5
0.0035
E15 cortex
AAGCTGGCGT
(
2
)
4.9
0.0049
P1 cortex
CCCTTAAGAA
(
4
)
4.5
0.0045
P1 cortex
TCACCTTCTG
(
2
)
4.5
0.0045
Hypothalamus
TCACCTTCTG
(
2
)
1.8
0.0018
Hypothalamus
TGGGTGTTAG
(
2
)
1.8
0.0018
E12.5 retina
TCACCTTCTG
(
2
)
11.3
0.0113
E12.5 retina
AAGAAAGAGT
(
2
)
1.9
0.0019
E14.5 retina
TCACCTTCTG
(
2
)
12.8
0.0128
E14.5 retina
CCCTTAAGAA
(
4
)
1.8
0.0018
E14.5 retina
TGGGTGTTAG
(
2
)
1.8
0.0018
E16.5 retina
TCACCTTCTG
(
2
)
5.4
0.0054
E16.5 retina
CCCTTAAGAA
(
4
)
3.6
0.0036
E16.5 retina
AAGAAAGAGT
(
2
)
1.8
0.0018
E16.5 retina
ATTTCGGATG
(
2
)
1.8
0.0018
E18.5 retina
TCACCTTCTG
(
2
)
3.6
0.0036
E18.5 retina
TGGGTGTTAG
(
2
)
3.6
0.0036
E18.5 retina
ATTTCGGATG
(
2
)
1.8
0.0018
P0.5 retina
CCCTTAAGAA
(
4
)
5.9
0.0059
P0.5 retina
AAGCTGGCGT
(
2
)
2
0.002
P0.5 retina
TCACCTTCTG
(
2
)
2
0.002
P2.5 retina
CCCTTAAGAA
(
4
)
1.8
0.0018
P2.5 retina
TCACCTTCTG
(
2
)
1.8
0.0018
P4.5 retina
CCCTTAAGAA
(
4
)
2
0.002
P6.5 retina
TCACCTTCTG
(
2
)
6.7
0.0067
P6.5 retina
CCCTTAAGAA
(
4
)
5
0.005
P6.5 retina
TGGGTGTTAG
(
2
)
3.3
0.0033
P10.5 crx- retina
TCACCTTCTG
(
2
)
9.3
0.0093
P10.5 crx- retina
AAGAAAGAGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCACCTTCTG
(
2
)
3.8
0.0038
P10.5 crx+ retina
ATTTCGGATG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCCTTAAGAA
(
4
)
1.9
0.0019
Adult retinal
TCACCTTCTG
(
2
)
7.4
0.0074
Adult retinal
CCCTTAAGAA
(
4
)
3.7
0.0037
