Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293517	Sdf4	stromal cell derived factor 4	4		20318
Gene Ontology	calcium ion binding | extracellular space | Golgi apparatus
Human Homolog	Cab45[calcium binding protein Cab45 precursor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCAGGTTT (2) 17.9 0.0179 P8 Cb GC ATGGTGGTTC (2) 1.6 0.0016 Cb medulloblastoma GCCCAGGTTT (2) 25.4 0.0254 Cb medulloblastoma ATGGTGGTTC (2) 13.9 0.0139 Cb medulloblastoma GTCTGGCTGG (2) 2.3 0.0023 Cb medulloblastoma TGTCTGAGGC 2.3 0.0023 P8 GC+1d culture GCCCAGGTTT (2) 22.8 0.0228 P8 GC+1d culture AGCTTGCTGC 2.3 0.0023 P8 GC+1d culture ATGGTGGTTC (2) 2.3 0.0023 P8 GC+1d culture TGTCTGAGGC 1.1 0.0011 P8 GC+SHH+1d culture GCCCAGGTTT (2) 16.4 0.0164 P8 GC+SHH+1d culture ATGGTGGTTC (2) 1.2 0.0012 3T3 fibroblasts ATGGTGGTTC (2) 3.5 0.0035 E15 cortex GCCCAGGTTT (2) 9.9 0.0099 E15 cortex ATGGTGGTTC (2) 4.9 0.0049 E15 cortex GTCTGGCTGG (2) 4.9 0.0049 P1 cortex GCCCAGGTTT (2) 4.5 0.0045 Hypothalamus GCCCAGGTTT (2) 16.3 0.0163 Hypothalamus GTCTGGCTGG (2) 3.6 0.0036 Hypothalamus ATGGTGGTTC (2) 1.8 0.0018 E12.5 retina GCCCAGGTTT (2) 7.5 0.0075 E14.5 retina GCCCAGGTTT (2) 10.9 0.0109 E14.5 retina AGCTTGCTGC 1.8 0.0018 E16.5 retina GCCCAGGTTT (2) 12.7 0.0127 E18.5 retina GCCCAGGTTT (2) 18.2 0.0182 P0.5 retina GCCCAGGTTT (2) 5.9 0.0059 P2.5 retina GCCCAGGTTT (2) 21.1 0.0211 P4.5 retina GCCCAGGTTT (2) 17.8 0.0178 P4.5 retina ATGGTGGTTC (2) 2 0.002 P6.5 retina GCCCAGGTTT (2) 15 0.015 P6.5 retina ATGGTGGTTC (2) 1.7 0.0017 P10.5 crx- retina GCCCAGGTTT (2) 7.4 0.0074 P10.5 crx- retina ATGGTGGTTC (2) 3.7 0.0037 P10.5 crx+ retina GCCCAGGTTT (2) 15.4 0.0154 P10.5 crx+ retina AGCTTGCTGC 1.9 0.0019 P10.5 crx+ retina ATGGTGGTTC (2) 1.9 0.0019 P10.5 crx+ retina TGTCTGAGGC 1.9 0.0019 Adult retinal ATGGTGGTTC (2) 5.6 0.0056 Adult retinal GCCCAGGTTT (2) 5.6 0.0056 Adult retinal GTCTGGCTGG (2) 1.9 0.0019 ONL GCCCAGGTTT (2) 13.4 0.0134 ONL ATGGTGGTTC (2) 1.9 0.0019