Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29644	2610007K22Rik	RIKEN cDNA 2610007K22 gene	15		67040
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX17[DEAD (Asp-Glu-Ala-Asp) box polypeptide 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCCCGCGC 3.3 0.0033 P8 Cb GC GAGACAAGAG 3.3 0.0033 P8 Cb GC GAGGGCTGAA (3) 3.3 0.0033 P8 Cb GC GAGTTAACCC (3) 1.6 0.0016 P8 Cb GC GCAGGAGTGA (3) 1.6 0.0016 P8 Cb GC GCCACTGTGT (2) 1.6 0.0016 P8 Cb GC GTATAATGCT 1.6 0.0016 Cb medulloblastoma GGCTGTCCTG (2) 4.6 0.0046 Cb medulloblastoma CTCCCCGCGC 2.3 0.0023 Cb medulloblastoma CTTGGCATTC 2.3 0.0023 Cb medulloblastoma GCAGGAGTGA (3) 2.3 0.0023 P8 GC+1d culture GGCTGTCCTG (2) 13.7 0.0137 P8 GC+1d culture CATCAAGGGT 1.1 0.0011 P8 GC+1d culture CCCCCTCCCC (2) 1.1 0.0011 P8 GC+1d culture GTATAATGCT 1.1 0.0011 P8 GC+SHH+1d culture GGCTGTCCTG (2) 10.5 0.0105 P8 GC+SHH+1d culture GCAGGAGTGA (3) 3.5 0.0035 P8 GC+SHH+1d culture CTTGGCATTC 1.2 0.0012 P8 GC+SHH+1d culture GCCACTGTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTATAATGCT 1.2 0.0012 3T3 fibroblasts GGCTGTCCTG (2) 31.5 0.0315 3T3 fibroblasts CTCCCCGCGC 3.5 0.0035 3T3 fibroblasts GCAGGAGTGA (3) 3.5 0.0035 3T3 fibroblasts GCCACTGTGT (2) 3.5 0.0035 3T3 fibroblasts GTGGGTTTAA 3.5 0.0035 E15 cortex GGCTGTCCTG (2) 34.6 0.0346 P1 cortex GGCTGTCCTG (2) 18.2 0.0182 P1 cortex CCCCTAACAA 4.5 0.0045 Hypothalamus GGCTGTCCTG (2) 3.6 0.0036 Hypothalamus GGAAATAAAG 1.8 0.0018 Hypothalamus GTATAATGCT 1.8 0.0018 Hypothalamus TACTGAGTGA 1.8 0.0018 E12.5 retina GGCTGTCCTG (2) 5.6 0.0056 E12.5 retina GCAGGAGTGA (3) 3.8 0.0038 E12.5 retina GTATAATGCT 3.8 0.0038 E12.5 retina CCCCCTCCCC (2) 1.9 0.0019 E12.5 retina CTTGTGGCAT 1.9 0.0019 E14.5 retina GGCTGTCCTG (2) 3.6 0.0036 E14.5 retina GTGGGTTTAA 1.8 0.0018 E16.5 retina GCAGGAGTGA (3) 1.8 0.0018 E16.5 retina GGCTGTCCTG (2) 1.8 0.0018 E18.5 retina GGCTGTCCTG (2) 5.5 0.0055 E18.5 retina CCCCTAACAA 1.8 0.0018 E18.5 retina TACTGAGTGA 1.8 0.0018 P0.5 retina GGCTGTCCTG (2) 31.4 0.0314 P0.5 retina CATCAAGGGT 7.9 0.0079 P0.5 retina CCCCCTCCCC (2) 2 0.002 P0.5 retina TACTGAGTGA 2 0.002 P2.5 retina GGCTGTCCTG (2) 14.1 0.0141 P2.5 retina CCCCCTCCCC (2) 5.3 0.0053 P2.5 retina GCAGGAGTGA (3) 5.3 0.0053 P2.5 retina CCCCTAACAA 1.8 0.0018 P2.5 retina GAGTTAACCC (3) 1.8 0.0018 P2.5 retina GGGCTGTCCT (2) 1.8 0.0018 P2.5 retina GTATAATGCT 1.8 0.0018 P2.5 retina TACTGAGTGA 1.8 0.0018 P4.5 retina GGCTGTCCTG (2) 11.9 0.0119 P4.5 retina GAGACAAGAG 4 0.004 P4.5 retina CCCCCTCCCC (2) 2 0.002 P4.5 retina CTTGTGGCAT 2 0.002 P4.5 retina GCAGGAGTGA (3) 2 0.002 P6.5 retina GGCTGTCCTG (2) 16.7 0.0167 P6.5 retina TACTGAGTGA 6.7 0.0067 P6.5 retina GGAAATAAAG 5 0.005 P6.5 retina GTATAATGCT 3.3 0.0033 P10.5 crx- retina GCAGGAGTGA (3) 3.7 0.0037 P10.5 crx- retina GGCTGTCCTG (2) 3.7 0.0037 P10.5 crx+ retina GGCTGTCCTG (2) 9.6 0.0096 P10.5 crx+ retina GAGGGCTGAA (3) 1.9 0.0019 P10.5 crx+ retina GAGTTAACCC (3) 1.9 0.0019 P10.5 crx+ retina GCAGGAGTGA (3) 1.9 0.0019 P10.5 crx+ retina GCCACTGTGT (2) 1.9 0.0019 P10.5 crx+ retina GTGGGTTTAA 1.9 0.0019 Adult retinal GGCTGTCCTG (2) 46.3 0.0463 Adult retinal CATCAAGGGT 3.7 0.0037 Adult retinal GGGCTGTCCT (2) 3.7 0.0037 Adult retinal CCCCCTCCCC (2) 1.9 0.0019 Adult retinal CTTGGCATTC 1.9 0.0019 Adult retinal CTTGTGGCAT 1.9 0.0019 Adult retinal GTATAATGCT 1.9 0.0019 ONL GGCTGTCCTG (2) 7.7 0.0077 ONL GCAGGAGTGA (3) 5.7 0.0057 ONL TACTGAGTGA 3.8 0.0038 ONL CCCCTAACAA 1.9 0.0019