Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296520	Vps35	vacuolar protein sorting 35	8	8 38.0 cM	65114
Gene Ontology	integral to membrane | protein transport | secretory pathway | transport | vacuolar protein processing/maturation
Human Homolog	VPS35[vacuolar protein sorting 35 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCAGAAGCA 13.1 0.0131 Cb medulloblastoma GTCAGAAGCA 11.6 0.0116 P8 GC+1d culture GTCAGAAGCA 9.1 0.0091 P8 GC+1d culture GATTTGTACT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTCAGAAGCA 3.5 0.0035 P8 GC+SHH+1d culture GATTTGTACT (2) 1.2 0.0012 3T3 fibroblasts GGATTTGTAC (3) 3.5 0.0035 3T3 fibroblasts GTCAGAAGCA 3.5 0.0035 E15 cortex GGATTTGTAC (3) 4.9 0.0049 E15 cortex GTCAGAAGCA 4.9 0.0049 P1 cortex ACTGATCTGC 4.5 0.0045 P1 cortex GTCAGAAGCA 4.5 0.0045 Hypothalamus GTCAGAAGCA 3.6 0.0036 Hypothalamus GGATTTGTAC (3) 1.8 0.0018 E12.5 retina GATTTGTACT (2) 26.3 0.0263 E12.5 retina GTCAGAAGCA 1.9 0.0019 E14.5 retina ACTGATCTGC 1.8 0.0018 E14.5 retina GGATTTGTAC (3) 1.8 0.0018 E14.5 retina GTCAGAAGCA 1.8 0.0018 E14.5 retina TTGACCAAAA 1.8 0.0018 E16.5 retina GTCAGAAGCA 16.3 0.0163 E16.5 retina ACTGATCTGC 1.8 0.0018 E16.5 retina TTGACCAAAA 1.8 0.0018 E18.5 retina GGATTTGTAC (3) 3.6 0.0036 E18.5 retina ACTGATCTGC 1.8 0.0018 P0.5 retina GATTTGTACT (2) 137.4 0.1374 P0.5 retina GTCAGAAGCA 7.9 0.0079 P0.5 retina GGATTTGTAC (3) 5.9 0.0059 P2.5 retina ACTGATCTGC 1.8 0.0018 P2.5 retina GGATTTGTAC (3) 1.8 0.0018 P2.5 retina GTCAGAAGCA 1.8 0.0018 P4.5 retina GTCAGAAGCA 9.9 0.0099 P6.5 retina GTCAGAAGCA 6.7 0.0067 P10.5 crx- retina GTCAGAAGCA 18.6 0.0186 P10.5 crx- retina GATTTGTACT (2) 9.3 0.0093 P10.5 crx+ retina GTCAGAAGCA 11.5 0.0115 P10.5 crx+ retina GATTTGTACT (2) 5.8 0.0058 P10.5 crx+ retina ACTGATCTGC 1.9 0.0019 P10.5 crx+ retina TTGACCAAAA 1.9 0.0019 Adult retinal GTCAGAAGCA 9.3 0.0093 Adult retinal GATTTGTACT (2) 1.9 0.0019 Adult retinal GGATTTGTAC (3) 1.9 0.0019 ONL GTCAGAAGCA 5.7 0.0057 ONL TTGACCAAAA 1.9 0.0019