Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296922	Tpt1	tumor protein, translationally-controlled 1	6	14 43.0 cM	22070
Gene Ontology	anti-apoptosis | calcium ion binding | cytoplasm | protein binding
Human Homolog	TPT1[tumor protein, translationally-controlled 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 202 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTTGTCT 577.5 0.5775 P8 Cb GC TTTTTTTTCC (3) 11.4 0.0114 P8 Cb GC TAAATCCAAA 9.8 0.0098 P8 Cb GC TGGGTTGTAT 8.2 0.0082 P8 Cb GC TGGGTTGTTT 8.2 0.0082 P8 Cb GC ATTTTCTTTA 4.9 0.0049 P8 Cb GC TAGTCTTTGA 4.9 0.0049 P8 Cb GC TGGGGTTGTC 4.9 0.0049 P8 Cb GC AAATCACTCA 3.3 0.0033 P8 Cb GC AATGGAGTCA 3.3 0.0033 P8 Cb GC TGGGGTTGGC (2) 1.6 0.0016 P8 Cb GC TGGGTCGTCT 1.6 0.0016 P8 Cb GC TGGGTTGTCC 1.6 0.0016 P8 Cb GC TTCTCACCAA 1.6 0.0016 P8 Cb GC TTTTCACCAA 1.6 0.0016 Cb medulloblastoma TGGGTTGTCT 235.9 0.2359 Cb medulloblastoma TGGGTGTCTA 6.9 0.0069 Cb medulloblastoma TAAATCCAAA 4.6 0.0046 Cb medulloblastoma TGGGTTGTTT 4.6 0.0046 Cb medulloblastoma TTTTTTTTCC (3) 4.6 0.0046 Cb medulloblastoma AATGGAGTCA 2.3 0.0023 Cb medulloblastoma TGGGGTGTCC 2.3 0.0023 P8 GC+1d culture TGGGTTGTCT 537.7 0.5377 P8 GC+1d culture TAAATCCAAA 6.8 0.0068 P8 GC+1d culture ATTTTCTTTA 2.3 0.0023 P8 GC+1d culture TGGGTGTCTA 2.3 0.0023 P8 GC+1d culture TGGGTTGTCC 2.3 0.0023 P8 GC+1d culture TTTTTTTTCC (3) 2.3 0.0023 P8 GC+1d culture AAATCACTCA 1.1 0.0011 P8 GC+1d culture TGGGATGTCT 1.1 0.0011 P8 GC+1d culture TGGGTCGTCT 1.1 0.0011 P8 GC+1d culture TGGGTTGTAT 1.1 0.0011 P8 GC+1d culture TGGGTTGTTT 1.1 0.0011 P8 GC+SHH+1d culture TGGGTTGTCT 530.4 0.5304 P8 GC+SHH+1d culture TTTTTTTTCC (3) 5.9 0.0059 P8 GC+SHH+1d culture TAAATCCAAA 4.7 0.0047 P8 GC+SHH+1d culture ATTTTCTTTA 3.5 0.0035 P8 GC+SHH+1d culture TGGGTGTCTA 3.5 0.0035 P8 GC+SHH+1d culture TGGGATGTCT 2.3 0.0023 P8 GC+SHH+1d culture TGGGTCGTCT 2.3 0.0023 P8 GC+SHH+1d culture TGGGTTGTTT 2.3 0.0023 P8 GC+SHH+1d culture AACCATCACT 1.2 0.0012 P8 GC+SHH+1d culture TGGGGTTGTC 1.2 0.0012 P8 GC+SHH+1d culture TGGGTTGTAT 1.2 0.0012 3T3 fibroblasts TGGGTTGTCT 147.2 0.1472 3T3 fibroblasts ATTGGCTGCT 3.5 0.0035 3T3 fibroblasts GCGTCATAAC 3.5 0.0035 3T3 fibroblasts TTTTTTTTCC (3) 3.5 0.0035 E15 cortex TGGGTTGTCT 272.1 0.2721 E15 cortex TGGCTTGTCT 4.9 0.0049 E15 cortex TGGGGTTGGC (2) 4.9 0.0049 E15 cortex TGGGTGTCTA 4.9 0.0049 P1 cortex TGGGTTGTCT 290.9 0.2909 P1 cortex TCCGTGGGTG 13.6 0.0136 P1 cortex AATCCAGATG 4.5 0.0045 P1 cortex ATTTTCTTTA 4.5 0.0045 P1 cortex TAAATCCAAA 4.5 0.0045 P1 cortex TGGGTTGGCT 4.5 0.0045 Hypothalamus TGGGTTGTCT 382.2 0.3822 Hypothalamus TGGGTTGTTT 19.9 0.0199 Hypothalamus TTTTTTTTCC (3) 12.7 0.0127 Hypothalamus TAAATCCAAA 7.2 0.0072 Hypothalamus TAGTCTTTGA 3.6 0.0036 Hypothalamus AAATCACTCA 1.8 0.0018 Hypothalamus ATTTTCTTTA 1.8 0.0018 Hypothalamus TGGGTGTCTA 1.8 0.0018 Hypothalamus TGGGTTGTAT 1.8 0.0018 E12.5 retina TGGGTTGTCT 963.1 0.9631 E12.5 retina TGGGTTGTTT 11.3 0.0113 E12.5 retina TGGGGTTGTC 7.5 0.0075 E12.5 retina ATTTTCTTTA 5.6 0.0056 E12.5 retina TTTTCACCAA 5.6 0.0056 E12.5 retina TGGGTCGTCT 3.8 0.0038 E12.5 retina TGGGTTGTCC 3.8 0.0038 E12.5 retina AAATCACTCA 1.9 0.0019 E12.5 retina TAAATCCAAA 1.9 0.0019 E12.5 retina TTTTTTTTCC (3) 1.9 0.0019 E14.5 retina TGGGTTGTCT 1189.8 1.1898 E14.5 retina TTTTTTTTCC (3) 18.2 0.0182 E14.5 retina TGGGTTGTTT 16.4 0.0164 E14.5 retina AACCATCACT 12.8 0.0128 E14.5 retina AATGGAGTCA 7.3 0.0073 E14.5 retina TAGTCTTTGA 5.5 0.0055 E14.5 retina ATTTTCTTTA 3.6 0.0036 E14.5 retina TGGGTCGTCT 3.6 0.0036 E14.5 retina TGGGTTGGCT 3.6 0.0036 E14.5 retina TTTTCACCAA 3.6 0.0036 E14.5 retina AAATCACTCA 1.8 0.0018 E14.5 retina AATCCAGATG 1.8 0.0018 E14.5 retina ATTGGCTGCT 1.8 0.0018 E14.5 retina TGGGGTTGTC 1.8 0.0018 E14.5 retina TGGGTTGTAT 1.8 0.0018 E16.5 retina TGGGTTGTCT 1233.4 1.2334 E16.5 retina TTTTTTTTCC (3) 36.2 0.0362 E16.5 retina ATTTTCTTTA 16.3 0.0163 E16.5 retina AATGGAGTCA 10.9 0.0109 E16.5 retina TGGGTTGGCT 10.9 0.0109 E16.5 retina AAATCACTCA 9.1 0.0091 E16.5 retina TGGGTTGTCC 7.2 0.0072 E16.5 retina TGGGTTGTTT 7.2 0.0072 E16.5 retina TTTTCACCAA 7.2 0.0072 E16.5 retina AACCATCACT 5.4 0.0054 E16.5 retina TAGTCTTTGA 3.6 0.0036 E16.5 retina AATCCAGATG 1.8 0.0018 E16.5 retina TAAATCCAAA 1.8 0.0018 E16.5 retina TGGGGTTGTC 1.8 0.0018 E16.5 retina TGGGTCGTCT 1.8 0.0018 E16.5 retina TGGGTGTCTA 1.8 0.0018 E18.5 retina TGGGTTGTCT 1758.9 1.7589 E18.5 retina TGGGTTGTTT 58.2 0.0582 E18.5 retina TTTTTTTTCC (3) 21.8 0.0218 E18.5 retina TGGGTTGTAT 7.3 0.0073 E18.5 retina TTTTCACCAA 7.3 0.0073 E18.5 retina AATGGAGTCA 5.5 0.0055 E18.5 retina TAGTCTTTGA 5.5 0.0055 E18.5 retina TGGGTCGTCT 5.5 0.0055 E18.5 retina TGGGTTGGCT 5.5 0.0055 E18.5 retina GCGTCATAAC 3.6 0.0036 E18.5 retina TAAATCCAAA 3.6 0.0036 E18.5 retina AACCATCACT 1.8 0.0018 E18.5 retina ATTTTCTTTA 1.8 0.0018 E18.5 retina TGGCTTGTCT 1.8 0.0018 E18.5 retina TGGGGTTGTC 1.8 0.0018 E18.5 retina TGGGTGTCTA 1.8 0.0018 P0.5 retina TGGGTTGTCT 724.2 0.7242 P0.5 retina TGGGTTGTTT 13.7 0.0137 P0.5 retina TGGGTTGTCC 7.9 0.0079 P0.5 retina TGGGGTTGTC 5.9 0.0059 P0.5 retina TAAATCCAAA 3.9 0.0039 P0.5 retina TTTTTTTTCC (3) 3.9 0.0039 P0.5 retina AAATCACTCA 2 0.002 P0.5 retina AATCCAGATG 2 0.002 P0.5 retina AATGGAGTCA 2 0.002 P0.5 retina ATTGGCTGCT 2 0.002 P0.5 retina ATTTTCTTTA 2 0.002 P0.5 retina TGGGTCGTCT 2 0.002 P0.5 retina TGGGTGTCTA 2 0.002 P0.5 retina TGGGTTGGCT 2 0.002 P0.5 retina TTTTCACCAA 2 0.002 P2.5 retina TGGGTTGTCT 712.7 0.7127 P2.5 retina TAAATCCAAA 29.9 0.0299 P2.5 retina TGGGTTGTTT 21.1 0.0211 P2.5 retina TGGGTTGGCT 7 0.007 P2.5 retina TTTTTTTTCC (3) 5.3 0.0053 P2.5 retina TAGTCTTTGA 3.5 0.0035 P2.5 retina TGGGGTTGTC 3.5 0.0035 P2.5 retina AATCCAGATG 1.8 0.0018 P2.5 retina TGGGGTGTCC 1.8 0.0018 P2.5 retina TGGGGTTGGC (2) 1.8 0.0018 P4.5 retina TGGGTTGTCT 754.9 0.7549 P4.5 retina TGGGTTGGCT 9.9 0.0099 P4.5 retina TTTTTTTTCC (3) 9.9 0.0099 P4.5 retina TGGGTTGTTT 5.9 0.0059 P4.5 retina TAAATCCAAA 4 0.004 P4.5 retina TGGGTCGTCT 4 0.004 P4.5 retina AATGGAGTCA 2 0.002 P4.5 retina ATTTTCTTTA 2 0.002 P4.5 retina TGGGGTTGTC 2 0.002 P4.5 retina TGGGTTGTCC 2 0.002 P6.5 retina TGGGTTGTCT 360.1 0.3601 P6.5 retina TAAATCCAAA 8.3 0.0083 P6.5 retina TGGGTTGTTT 6.7 0.0067 P6.5 retina TGGGTTGGCT 3.3 0.0033 P6.5 retina TTTTTTTTCC (3) 3.3 0.0033 P6.5 retina AACCATCACT 1.7 0.0017 P6.5 retina ATTTTCTTTA 1.7 0.0017 P6.5 retina TAGTCTTTGA 1.7 0.0017 P6.5 retina TGGGGTTGTC 1.7 0.0017 P6.5 retina TGGGTCGTCT 1.7 0.0017 P6.5 retina TGGGTTGTCC 1.7 0.0017 P10.5 crx- retina TGGGTTGTCT 209.9 0.2099 P10.5 crx- retina AACCATCACT 7.4 0.0074 P10.5 crx- retina ATTTTCTTTA 7.4 0.0074 P10.5 crx- retina TGGGTTGTTT 5.6 0.0056 P10.5 crx- retina TGGGGTTGGC (2) 3.7 0.0037 P10.5 crx- retina AAATCACTCA 1.9 0.0019 P10.5 crx- retina AATCCAGATG 1.9 0.0019 P10.5 crx- retina TAAATCCAAA 1.9 0.0019 P10.5 crx- retina TGGGGTTGTC 1.9 0.0019 P10.5 crx- retina TGGGTCGTCT 1.9 0.0019 P10.5 crx- retina TGGGTTGGCT 1.9 0.0019 P10.5 crx- retina TTCTCACCAA 1.9 0.0019 P10.5 crx+ retina TGGGTTGTCT 317.2 0.3172 P10.5 crx+ retina TGGGTTGTTT 5.8 0.0058 P10.5 crx+ retina TAAATCCAAA 3.8 0.0038 P10.5 crx+ retina TTTTTTTTCC (3) 3.8 0.0038 P10.5 crx+ retina ATTTTCTTTA 1.9 0.0019 P10.5 crx+ retina TGGGTCGTCT 1.9 0.0019 P10.5 crx+ retina TTCTCACCAA 1.9 0.0019 Adult retinal TGGGTTGTCT 150 0.15 Adult retinal TAAATCCAAA 7.4 0.0074 Adult retinal TGGGGTGTCC 1.9 0.0019 Adult retinal TGGGGTTGGC (2) 1.9 0.0019 Adult retinal TGGGTTGGCT 1.9 0.0019 Adult retinal TGGGTTGTAT 1.9 0.0019 Adult retinal TGGGTTGTCC 1.9 0.0019 Adult retinal TGGGTTGTTT 1.9 0.0019 Adult retinal TTTTTTTTCC (3) 1.9 0.0019 ONL TGGGTTGTCT 147.5 0.1475 ONL TGGGTTGGCT 1.9 0.0019 ONL TGGGTTGTTT 1.9 0.0019 ONL TTTTTTTTCC (3) 1.9 0.0019