Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.297976
Gpc1
glypican 1
1
14733
Gene Ontology
extracellular matrix
|
extracellular space
Human Homolog
GPC1[glypican 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAGCCTTCT
1.6
0.0016
P8 Cb GC
CAGAAGGCCT
(
2
)
1.6
0.0016
P8 Cb GC
CTGTACAGGG
(
2
)
1.6
0.0016
Cb medulloblastoma
AGTCCTGCCA
13.9
0.0139
Cb medulloblastoma
CTGTACAGGG
(
2
)
4.6
0.0046
Cb medulloblastoma
ACCTCAAAAA
2.3
0.0023
Cb medulloblastoma
CAGAAGGCCT
(
2
)
2.3
0.0023
Cb medulloblastoma
GGCCCAACAA
2.3
0.0023
P8 GC+1d culture
CTGTACAGGG
(
2
)
4.6
0.0046
P8 GC+1d culture
ACCTCAAAAA
2.3
0.0023
P8 GC+1d culture
AGTCCTGCCA
2.3
0.0023
P8 GC+1d culture
ATAGCCTTCT
2.3
0.0023
P8 GC+1d culture
GGCCCAACAA
2.3
0.0023
P8 GC+SHH+1d culture
CTGTACAGGG
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
CAGAAGGCCT
(
2
)
7
0.007
P8 GC+SHH+1d culture
GGCCCAACAA
7
0.007
P8 GC+SHH+1d culture
ACCTCAAAAA
3.5
0.0035
P8 GC+SHH+1d culture
AGTCCTGCCA
1.2
0.0012
P8 GC+SHH+1d culture
ATAGCCTTCT
1.2
0.0012
P8 GC+SHH+1d culture
GGTGCTGCTG
1.2
0.0012
3T3 fibroblasts
CAGAAGGCCT
(
2
)
7
0.007
3T3 fibroblasts
CTGTACAGGG
(
2
)
7
0.007
E15 cortex
CTGTACAGGG
(
2
)
4.9
0.0049
P1 cortex
GGCCCAACAA
9.1
0.0091
P1 cortex
CAGAAGGCCT
(
2
)
4.5
0.0045
Hypothalamus
AGTCCTGCCA
5.4
0.0054
Hypothalamus
ACCTCAAAAA
3.6
0.0036
Hypothalamus
GGCCCAACAA
1.8
0.0018
E12.5 retina
CTGTACAGGG
(
2
)
5.6
0.0056
E12.5 retina
ACCTCAAAAA
1.9
0.0019
E12.5 retina
CAGAAGGCCT
(
2
)
1.9
0.0019
E12.5 retina
GGCCCAACAA
1.9
0.0019
E14.5 retina
ACCTCAAAAA
3.6
0.0036
E14.5 retina
GGCCCAACAA
3.6
0.0036
E16.5 retina
CAGAAGGCCT
(
2
)
1.8
0.0018
E16.5 retina
CTGTACAGGG
(
2
)
1.8
0.0018
E16.5 retina
GGCCCAACAA
1.8
0.0018
E16.5 retina
GGTGCTGCTG
1.8
0.0018
E18.5 retina
GGCCCAACAA
3.6
0.0036
P0.5 retina
CTGTACAGGG
(
2
)
5.9
0.0059
P0.5 retina
GGTGCTGCTG
5.9
0.0059
P0.5 retina
AGTCCTGCCA
2
0.002
P0.5 retina
CAGAAGGCCT
(
2
)
2
0.002
P0.5 retina
GGCCCAACAA
2
0.002
P2.5 retina
CAGAAGGCCT
(
2
)
5.3
0.0053
P2.5 retina
CTGTACAGGG
(
2
)
5.3
0.0053
P2.5 retina
GGCCCAACAA
3.5
0.0035
P2.5 retina
ACCTCAAAAA
1.8
0.0018
P2.5 retina
GGTGCTGCTG
1.8
0.0018
P4.5 retina
GGCCCAACAA
4
0.004
P4.5 retina
ACCTCAAAAA
2
0.002
P4.5 retina
AGTCCTGCCA
2
0.002
P6.5 retina
CTGTACAGGG
(
2
)
6.7
0.0067
P6.5 retina
CAGAAGGCCT
(
2
)
5
0.005
P6.5 retina
AGTCCTGCCA
1.7
0.0017
P6.5 retina
GGCCCAACAA
1.7
0.0017
P10.5 crx- retina
AGTCCTGCCA
3.7
0.0037
P10.5 crx- retina
GGCCCAACAA
3.7
0.0037
P10.5 crx- retina
CAGAAGGCCT
(
2
)
1.9
0.0019
P10.5 crx- retina
CTGTACAGGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
AGTCCTGCCA
1.9
0.0019
P10.5 crx+ retina
CAGAAGGCCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGCCCAACAA
1.9
0.0019
Adult retinal
AGTCCTGCCA
3.7
0.0037
ONL
GGCCCAACAA
1.9
0.0019