Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298256	Ramp2	receptor (calcitonin) activity modifying protein 2	11	11 61.5 cM	54409
Mm.298256	9430072K23Rik	RIKEN cDNA 9430072K23 gene	19		77292
Mm.298256	2210401K01Rik	RIKEN cDNA 2210401K01 gene	19		72289
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAACTGACAA (4) 4.9 0.0049 P8 Cb GC AAGGCTTATT (4) 3.3 0.0033 P8 Cb GC GTGGTGGTTT (3) 3.3 0.0033 P8 Cb GC TTAGGGATAG (3) 3.3 0.0033 P8 Cb GC AAAGGGATCA (3) 1.6 0.0016 P8 Cb GC ACCTGAAGTC (3) 1.6 0.0016 P8 Cb GC GCGGAATTGC (3) 1.6 0.0016 P8 Cb GC GTGAAGATAG (3) 1.6 0.0016 P8 Cb GC GTGCCAAGGT (3) 1.6 0.0016 Cb medulloblastoma TAACTGACAA (4) 106.4 0.1064 Cb medulloblastoma AAGGCTTATT (4) 4.6 0.0046 Cb medulloblastoma AAAGCCCATC (3) 2.3 0.0023 Cb medulloblastoma ACATTATTTT (3) 2.3 0.0023 Cb medulloblastoma ACCTGAAGTC (3) 2.3 0.0023 Cb medulloblastoma GTGAAGATAG (3) 2.3 0.0023 Cb medulloblastoma GTGCCAAGGT (3) 2.3 0.0023 P8 GC+1d culture TAACTGACAA (4) 26.3 0.0263 P8 GC+1d culture CAATACTGCA (3) 1.1 0.0011 P8 GC+1d culture GTTACCTTGA (4) 1.1 0.0011 P8 GC+SHH+1d culture TAACTGACAA (4) 21.1 0.0211 P8 GC+SHH+1d culture CAGTGATGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTTACCTTGA (4) 1.2 0.0012 3T3 fibroblasts GTGCCAAGGT (3) 10.5 0.0105 3T3 fibroblasts GAGCTGCTCA (5) 7 0.007 3T3 fibroblasts AAGGCTTATT (4) 3.5 0.0035 3T3 fibroblasts CAGGAACATT (4) 3.5 0.0035 3T3 fibroblasts GTGGTGGTTT (3) 3.5 0.0035 3T3 fibroblasts TAACTGACAA (4) 3.5 0.0035 E15 cortex AGCCAGAGAT (3) 19.8 0.0198 E15 cortex AAGGCTTATT (4) 9.9 0.0099 E15 cortex AGTTGGAAAC (3) 4.9 0.0049 E15 cortex GAGCTGCTCA (5) 4.9 0.0049 E15 cortex TAACTGACAA (4) 4.9 0.0049 Hypothalamus TAACTGACAA (4) 101.4 0.1014 Hypothalamus GAGCTGCTCA (5) 3.6 0.0036 Hypothalamus ACCTGAAGTC (3) 1.8 0.0018 Hypothalamus AGGCCATTAC (3) 1.8 0.0018 Hypothalamus GCGGAATTGC (3) 1.8 0.0018 E12.5 retina AGGCCATTAC (3) 1.9 0.0019 E12.5 retina CAGTGATGAG (3) 1.9 0.0019 E14.5 retina AAAGCCCATC (3) 1.8 0.0018 E14.5 retina AAAGGGATCA (3) 1.8 0.0018 E16.5 retina TAACTGACAA (4) 3.6 0.0036 E16.5 retina ACATTATTTT (3) 1.8 0.0018 E16.5 retina AGCCAGAGAT (3) 1.8 0.0018 E16.5 retina GTTACCTTGA (4) 1.8 0.0018 E18.5 retina AAAGGGATCA (3) 5.5 0.0055 E18.5 retina TAACTGACAA (4) 3.6 0.0036 E18.5 retina AAGGCTTATT (4) 1.8 0.0018 E18.5 retina AGTTGGAAAC (3) 1.8 0.0018 E18.5 retina GTGAAGATAG (3) 1.8 0.0018 E18.5 retina GTGCCAAGGT (3) 1.8 0.0018 E18.5 retina GTTACCTTGA (4) 1.8 0.0018 P0.5 retina AGGCCATTAC (3) 3.9 0.0039 P0.5 retina GCGGAATTGC (3) 3.9 0.0039 P0.5 retina GGCCTTTGGC (3) 3.9 0.0039 P0.5 retina TAACTGACAA (4) 3.9 0.0039 P0.5 retina AAAGGGATCA (3) 2 0.002 P0.5 retina AGCCAGAGAT (3) 2 0.002 P0.5 retina AGTTGGAAAC (3) 2 0.002 P2.5 retina AAAGGGATCA (3) 5.3 0.0053 P2.5 retina AAGGCTTATT (4) 5.3 0.0053 P2.5 retina GGCCTTTGGC (3) 5.3 0.0053 P2.5 retina ACCTGAAGTC (3) 1.8 0.0018 P2.5 retina CAATACTGCA (3) 1.8 0.0018 P2.5 retina TAACTGACAA (4) 1.8 0.0018 P4.5 retina TAACTGACAA (4) 19.8 0.0198 P4.5 retina AAGGCTTATT (4) 7.9 0.0079 P4.5 retina AAAGGGATCA (3) 5.9 0.0059 P4.5 retina ACCTGAAGTC (3) 2 0.002 P4.5 retina GCGGAATTGC (3) 2 0.002 P4.5 retina GTGAAGATAG (3) 2 0.002 P4.5 retina GTGGTGGTTT (3) 2 0.002 P6.5 retina AAAGGGATCA (3) 8.3 0.0083 P6.5 retina AAAGCCCATC (3) 3.3 0.0033 P6.5 retina TAACTGACAA (4) 3.3 0.0033 P6.5 retina AAGGCTTATT (4) 1.7 0.0017 P6.5 retina ACCTGAAGTC (3) 1.7 0.0017 P6.5 retina AGCCAGAGAT (3) 1.7 0.0017 P6.5 retina AGTTGGAAAC (3) 1.7 0.0017 P6.5 retina CAATACTGCA (3) 1.7 0.0017 P6.5 retina GGCCTTTGGC (3) 1.7 0.0017 P6.5 retina TTAGGGATAG (3) 1.7 0.0017 P10.5 crx- retina AAAGGGATCA (3) 11.1 0.0111 P10.5 crx- retina AAGGCTTATT (4) 3.7 0.0037 P10.5 crx- retina CAGGAACATT (4) 1.9 0.0019 P10.5 crx- retina GAGCTGCTCA (5) 1.9 0.0019 P10.5 crx- retina GTGCCAAGGT (3) 1.9 0.0019 P10.5 crx- retina GTGGTGGTTT (3) 1.9 0.0019 P10.5 crx+ retina AAAGCCCATC (3) 7.7 0.0077 P10.5 crx+ retina ACCTGAAGTC (3) 5.8 0.0058 P10.5 crx+ retina AAGGCTTATT (4) 3.8 0.0038 P10.5 crx+ retina ACATTATTTT (3) 3.8 0.0038 P10.5 crx+ retina CAGTGATGAG (3) 3.8 0.0038 P10.5 crx+ retina TAACTGACAA (4) 3.8 0.0038 P10.5 crx+ retina AAAGGGATCA (3) 1.9 0.0019 P10.5 crx+ retina TTAGGGATAG (3) 1.9 0.0019 Adult retinal TAACTGACAA (4) 7.4 0.0074 Adult retinal AAAGGGATCA (3) 3.7 0.0037 Adult retinal AAAGCCCATC (3) 1.9 0.0019 Adult retinal ACATTATTTT (3) 1.9 0.0019 Adult retinal AGTTGGAAAC (3) 1.9 0.0019 Adult retinal GCGGAATTGC (3) 1.9 0.0019 ONL TAACTGACAA (4) 9.6 0.0096 ONL GCGGAATTGC (3) 3.8 0.0038 ONL AAAGGGATCA (3) 1.9 0.0019 ONL ACATTATTTT (3) 1.9 0.0019 ONL ACCTGAAGTC (3) 1.9 0.0019 ONL AGGCCATTAC (3) 1.9 0.0019