Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30158	Fads1	fatty acid desaturase 1	19		76267
Gene Ontology	fatty acid biosynthesis | fatty acid desaturation | linoleoyl-CoA desaturase activity | lipid biosynthesis | long-chain fatty acid biosynthesis | oxidoreductase activity
Human Homolog	FADS1[fatty acid desaturase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGTTTTTA (2) 6.5 0.0065 P8 Cb GC TCTGTCTTTA 3.3 0.0033 Cb medulloblastoma TCTGTCTTTA 4.6 0.0046 P8 GC+1d culture TCTGTCTTTA 3.4 0.0034 P8 GC+1d culture AAGGCCAACC (2) 1.1 0.0011 P8 GC+1d culture GAAGCTAGAG 1.1 0.0011 P8 GC+1d culture TCACAAACAG 1.1 0.0011 P8 GC+1d culture TCTGTTTTTA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTGTCTTTA 7 0.007 P8 GC+SHH+1d culture GAAGCTAGAG 1.2 0.0012 P1 cortex TCTGTCTTTT 9.1 0.0091 P1 cortex CAAGCTAAAT 4.5 0.0045 P1 cortex GAAGCTAGAG 4.5 0.0045 P1 cortex TCTGTTTTTA (2) 4.5 0.0045 Hypothalamus AAGGCCAACC (2) 16.3 0.0163 Hypothalamus TCTGTCTTTA 5.4 0.0054 E14.5 retina TCTGTTTTTA (2) 9.1 0.0091 E14.5 retina TCTGTCTTTA 3.6 0.0036 E14.5 retina GAAGCTAGAG 1.8 0.0018 E16.5 retina TCTGTCTTTA 9.1 0.0091 E16.5 retina TCTGTTTTTA (2) 7.2 0.0072 E16.5 retina TCACAAACAG 3.6 0.0036 E16.5 retina CAAGCTAAAT 1.8 0.0018 E18.5 retina TCTGTCTTTA 3.6 0.0036 E18.5 retina GAAGCTAGAG 1.8 0.0018 E18.5 retina TCTGTTTTTA (2) 1.8 0.0018 P2.5 retina TCTGTTTTTA (2) 10.6 0.0106 P2.5 retina CAAGCTAAAT 1.8 0.0018 P4.5 retina AAGGCCAACC (2) 2 0.002 P4.5 retina TCTGTTTTTA (2) 2 0.002 P6.5 retina TCTGTTTTTA (2) 3.3 0.0033 P6.5 retina TCTGTCTTTA 1.7 0.0017 P6.5 retina TCTGTCTTTT 1.7 0.0017 P10.5 crx- retina TCTGTTTTTA (2) 7.4 0.0074 P10.5 crx- retina TCTGTCTTTA 3.7 0.0037 P10.5 crx- retina TCTGTCTTTT 1.9 0.0019 P10.5 crx+ retina TCTGTCTTTT 5.8 0.0058 Adult retinal TCTGTCTTTT 5.6 0.0056 Adult retinal TCTGTTTTTA (2) 1.9 0.0019 ONL TCTGTCTTTT 1.9 0.0019