Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.319719	Rpl13	ribosomal protein L13	8		270106
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPL13[ribosomal protein L13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTGAAGC 42.4 0.0424 P8 Cb GC GCGCCCAGCC 3.3 0.0033 P8 Cb GC TGTACAAAAA 1.6 0.0016 Cb medulloblastoma ATACTGAAGC 16.2 0.0162 Cb medulloblastoma CGCAAGGCCC 2.3 0.0023 P8 GC+1d culture ATACTGAAGC 40 0.04 P8 GC+1d culture AGCTCAGGGT (2) 3.4 0.0034 P8 GC+SHH+1d culture ATACTGAAGC 39.8 0.0398 P8 GC+SHH+1d culture AGCTCAGGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCGCCCAGCC 1.2 0.0012 P8 GC+SHH+1d culture TGTACAAAAA 1.2 0.0012 3T3 fibroblasts ATACTGAAGC 98.1 0.0981 3T3 fibroblasts AGCTCAGGGT (2) 7 0.007 E15 cortex ATACTGAAGC 19.8 0.0198 E15 cortex AGCTCAGGGT (2) 9.9 0.0099 E15 cortex GCGCCCAGCC 4.9 0.0049 P1 cortex ATACTGAAGC 68.2 0.0682 P1 cortex TGTACAAAAA 4.5 0.0045 Hypothalamus ATACTGAAGC 9.1 0.0091 Hypothalamus AGCTCAGGGT (2) 1.8 0.0018 E12.5 retina ATACTGAAGC 46.9 0.0469 E12.5 retina CGCAAGGCCC 1.9 0.0019 E14.5 retina ATACTGAAGC 51 0.051 E14.5 retina AGCTCAGGGT (2) 1.8 0.0018 E14.5 retina CGCAAGGCCC 1.8 0.0018 E14.5 retina TGTACAAAAA 1.8 0.0018 E16.5 retina ATACTGAAGC 54.3 0.0543 E16.5 retina AGCTCAGGGT (2) 1.8 0.0018 E16.5 retina GCGCCCAGCC 1.8 0.0018 E18.5 retina ATACTGAAGC 21.8 0.0218 E18.5 retina AGCTCAGGGT (2) 1.8 0.0018 E18.5 retina CGCAAGGCCC 1.8 0.0018 E18.5 retina TGTACAAAAA 1.8 0.0018 P0.5 retina ATACTGAAGC 115.8 0.1158 P0.5 retina AGCTCAGGGT (2) 2 0.002 P2.5 retina ATACTGAAGC 40.5 0.0405 P2.5 retina AGCTCAGGGT (2) 3.5 0.0035 P4.5 retina ATACTGAAGC 17.8 0.0178 P6.5 retina ATACTGAAGC 16.7 0.0167 P6.5 retina AGCTCAGGGT (2) 3.3 0.0033 P10.5 crx- retina ATACTGAAGC 57.6 0.0576 P10.5 crx- retina ATGTTGAAAA 5.6 0.0056 P10.5 crx- retina AGCTCAGGGT (2) 1.9 0.0019 P10.5 crx+ retina ATACTGAAGC 11.5 0.0115 P10.5 crx+ retina GCACCCAGCT 3.8 0.0038 P10.5 crx+ retina AGCTCAGGGT (2) 1.9 0.0019 P10.5 crx+ retina ATGTTGAAAA 1.9 0.0019 Adult retinal ATACTGAAGC 29.6 0.0296 Adult retinal AGCTCAGGGT (2) 3.7 0.0037 Adult retinal ATGTTGAAAA 3.7 0.0037 ONL ATACTGAAGC 5.7 0.0057 ONL ATGTTGAAAA 5.7 0.0057 ONL CGCAAGGCCC 3.8 0.0038